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Category:All HeadlinesWorld & GeopoliticsMarkets & EconomyTech & AIPoliticsSearch results for: "Transcriptome size matter" (28 stories)

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Transcriptome size matters for single-cell RNA-seq normalization and bulk deconvolution
Lead StoryNaturegeneral
Feb 1, 2025

Transcriptome size matters for single-cell RNA-seq normalization and bulk deconvolution

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5BVk5fYm44M0VCUXZwUVZJYW84eGdTcmdzbE5JczVPY08zSUhRTkRQWHVrOHNieF9fQWtWd2szMk81NzFfd0Y2eEpzSWNlMGp1Y2hUYVMwajhwUWdSZWcw?oc=5" target="_blank">Transcriptome size matters for single-cell RNA-seq normalization and bulk deconvolution</a>  <font color="#6f6f6f">Nature</font>

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Search Results for "Transcriptome size matter"

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27 stories displayed
Computational tool incorporates transcriptome size to improve RNA-seq analysis
Phys.orggeneral

Computational tool incorporates transcriptome size to improve RNA-seq analysis

<a href="https://news.google.com/rss/articles/CBMigAFBVV95cUxQc1Y5bUVBZ3RlWDhLUlVaVm5VTEdKcW9CWWJQcjhKdzVOemswZVdydkw4QkNhY0p6d19DNGdlWmMtMWFvZzZCUFpVWFpoY09mNGl5Z0Y2WTh2eUlNaFhMVm83YkFJYk1hQ3VRem56TDRIdjdMcUNEMmFZQ3l6bk52Tg?oc=5" target="_blank">Computational tool incorporates transcriptome size to improve RNA-seq analysis</a>  <font color="#6f6f6f">Phys.org</font>

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An rRNA-depleted full-length transcriptome strategy using nanopore sequencing for identification of novel lncRNA isoforms
Naturegeneral

An rRNA-depleted full-length transcriptome strategy using nanopore sequencing for identification of novel lncRNA isoforms

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1mSjhmMVVWZXJkTGo2LWRnTllEN3BDV01ZN244MkV5aDJvSW95M3BMTEpBQnVIdlB0YktINDJpUzA4aGE0c1hMQ3VxQ2IzbnZFU2ttMTJSR0VQMzhyRTFn?oc=5" target="_blank">An rRNA-depleted full-length transcriptome strategy using nanopore sequencing for identification of novel lncRNA isoforms</a>  <font color="#6f6f6f">Nature</font>

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Genetic “Dark Matter” Could Lead to New Class of Therapeutics
Inside Precision Medicinegeneral

Genetic “Dark Matter” Could Lead to New Class of Therapeutics

<a href="https://news.google.com/rss/articles/CBMixAFBVV95cUxOUUdfX1c4dmZQWGZMQ2V2WlJFNlNMdU5MaUhOcGJVSDZqSXYxOG1RRE5GVkJfSHZrckE1cWVWM2MwUTBoVlZ1aHNFWnFOc0lFVlY4dnVzd0hQX3A3cjZSR21aREVyOFVEa0dLU2J4ZkJ4VkNKM2RhVGdaRHZlTDlxdVF6cXAyM3NIMTVoLXV4QkxtVUhzSkxfcnZRWGJIZ3p2RkNYNnBoQWhZVG41SGxpZklickpiWTNzMWQ1eGhMYUZKV1BM?oc=5" target="_blank">Genetic “Dark Matter” Could Lead to New Class of Therapeutics</a>  <font color="#6f6f6f">Inside Precision Medicine</font>

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Size matters: integrating tumour volume and immune activation signatures predicts immunotherapy response
Springer Nature Linkworld

Size matters: integrating tumour volume and immune activation signatures predicts immunotherapy response

<a href="https://news.google.com/rss/articles/CBMibEFVX3lxTE5EaG9Td1NPX3pyUmxMVlVkTzZtYjhISmxKQURRSGJrZU1Qcjk0eUVoTTU2LUt4bHR4QkxHZy1ZbG1FY1pMZ3k1MlBSY2tnYkpIU2ZWWlh4YUt0emgxcU1Hd1d3TTBwRHhWTkxrRw?oc=5" target="_blank">Size matters: integrating tumour volume and immune activation signatures predicts immunotherapy response</a>  <font color="#6f6f6f">Springer Nature Link</font>

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A benchmark of RNA-seq data normalization methods for transcriptome mapping on human genome-scale metabolic networks
Naturegeneral

A benchmark of RNA-seq data normalization methods for transcriptome mapping on human genome-scale metabolic networks

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5SXzIyMU5WRzJhUTFENTdURU1MRWxTc0tJOThwRUYtN0JhQ1UxSGpURmVFaHBVTXp5ZC1xSnNaWVBIc0sxQ1FVaEs1NWtUWHJQejRpbDRSMkJ2bmFyUVRn?oc=5" target="_blank">A benchmark of RNA-seq data normalization methods for transcriptome mapping on human genome-scale metabolic networks</a>  <font color="#6f6f6f">Nature</font>

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Aging is associated with a systemic length-associated transcriptome imbalance
Naturegeneral

Aging is associated with a systemic length-associated transcriptome imbalance

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE0zQ1dyNnFMS0ExV0J0cDVTbDcxX2hZSDdEOUlRclE2QnFwSWo4WkNGLVhKdzNyLWlxbnJRQVJXWmdvNFdmZWNON1JRVzZwOHo4cHM4UGIzR2hVaERtZExR?oc=5" target="_blank">Aging is associated with a systemic length-associated transcriptome imbalance</a>  <font color="#6f6f6f">Nature</font>

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Partitioning RNAs by length improves transcriptome reconstruction from short-read RNA-seq data
Naturegeneral

Partitioning RNAs by length improves transcriptome reconstruction from short-read RNA-seq data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFB3RGsxdkNtbXRIRXhVNzFwaHlPSXhIVnkyZnF6ZkRyTHg2eTVPZTNQOUJObHVYcGo5bDJoTko0ZmFNX3VXa0lLMkNlZmtvR3h3RlpkWWdKVUdEM1BSdWc4?oc=5" target="_blank">Partitioning RNAs by length improves transcriptome reconstruction from short-read RNA-seq data</a>  <font color="#6f6f6f">Nature</font>

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Full-length transcriptomes of 25 grassland plant species - Scientific Data
Naturegeneral

Full-length transcriptomes of 25 grassland plant species - Scientific Data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBkdWYzVkZlLXNyRGh5R1FjTW1Obk1laXVwS1l4ZUxGZ3g1NGhTc2g1Y3dZNWdiazBXejFGSEtYOTd5ekFsUFZmR09yc0R2ZTgwZldTMUhTbTRIbnNsc3Rn?oc=5" target="_blank">Full-length transcriptomes of 25 grassland plant species - Scientific Data</a>  <font color="#6f6f6f">Nature</font>

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Full-length transcriptome from different life stages of cobia ( Rachycentron canadum , Rachycentridae)
Naturegeneral

Full-length transcriptome from different life stages of cobia ( Rachycentron canadum , Rachycentridae)

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFB2V1JNMHBCekZCcXk4SXdQeXB4eEt6ZXd6YllhYnRyZDdNd3dfOGNTc3Exc21QUEFhTUJEOXlYYjQ2Z1llc3p3RWVuZktJZVJ6SjlpZmN0eFBMZ2VVenRN?oc=5" target="_blank">Full-length transcriptome from different life stages of cobia ( Rachycentron canadum , Rachycentridae)</a>  <font color="#6f6f6f">Nature</font>

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Brain and blood transcriptome profiles delineate common genetic pathways across suicidal ideation and suicide
Naturetech

Brain and blood transcriptome profiles delineate common genetic pathways across suicidal ideation and suicide

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5wTkhUMDFTZnpSdE1keVdWSGVHNlFVWXUzQlJVUXByVzVNYThpQXFHVjNTZlY4My1sTUtUT1lUYTNSUzNrb0tUUjNydDhaWTVDOFBCbV9HVVRLRVdhRjBz?oc=5" target="_blank">Brain and blood transcriptome profiles delineate common genetic pathways across suicidal ideation and suicide</a>  <font color="#6f6f6f">Nature</font>

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Full-length transcriptome analysis of multiple organs and identification of adaptive genes and pathways in Mikania micrantha
Naturegeneral

Full-length transcriptome analysis of multiple organs and identification of adaptive genes and pathways in Mikania micrantha

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5SdEowTFliQjVLYkJQdWtKS0VJcm9vVktFNmZES1NkNVplenpncVZpR2cxNXRsbXV5dGN0MWtZY2JkVko2Rk5seWxaUmhpQUhuaXBvUXFnOXVYR0FQRHNZ?oc=5" target="_blank">Full-length transcriptome analysis of multiple organs and identification of adaptive genes and pathways in Mikania micrantha</a>  <font color="#6f6f6f">Nature</font>

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Comparative transcriptome profiles of four sexually size dimorphic fish
Naturegeneral

Comparative transcriptome profiles of four sexually size dimorphic fish

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE85MTRDekV0Uk1fb2wzM1hHcjZmcDA1SU9CMGpMblhGZmdwd0VrdXIxSmE3S2xxbUJKX0pET3ZCNzdWZkRVc0pBNkEyb0hWejRCWWJMcGVydkhULWxxa2hz?oc=5" target="_blank">Comparative transcriptome profiles of four sexually size dimorphic fish</a>  <font color="#6f6f6f">Nature</font>

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Chromosome level genome and full length transcriptome of long whiskers catfish, Mystus gulio (Hamilton, 1822)
Naturegeneral

Chromosome level genome and full length transcriptome of long whiskers catfish, Mystus gulio (Hamilton, 1822)

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE11R1lMTmpkV2RXeTZvU1M2QkpFWVRsZFZrY0k1NGtmZzM3S0wzTFpXVDdmbGdrQXg3Rk9URmEwS3Z0aWxGR3Q5b05kUjhVTGVFY1RwN1ZJb2JldXl5cDVB?oc=5" target="_blank">Chromosome level genome and full length transcriptome of long whiskers catfish, Mystus gulio (Hamilton, 1822)</a>  <font color="#6f6f6f">Nature</font>

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Comprehensive analysis of Metacrinus rotundus full length transcriptome
Natureworld

Comprehensive analysis of Metacrinus rotundus full length transcriptome

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1qYks3UFY3S0F0RlRpci1PTkhQWmMwNkFpRFVHaF9mVk9oRzV3N0xrVEd4MFFRbVlvM2RfU2RXaXBLQmVQOVFrd1ZvZk5vRlJWNjdoTGtfUEhCVG8xTjlR?oc=5" target="_blank">Comprehensive analysis of Metacrinus rotundus full length transcriptome</a>  <font color="#6f6f6f">Nature</font>

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Chromosome level genome assembly and full-length transcriptome of blacktip trevally ( Caranx heberi
Naturegeneral

Chromosome level genome assembly and full-length transcriptome of blacktip trevally ( Caranx heberi

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1lZnZ1cG5xbnF6dkRfMmh3eGVCTHZNbnFZaC1FbTJDX09nWlcwdHQwODVIS202dnAxM3BNVFBMTkVUZnE5X1BveHhiRTZoZ2Izd0FwbExZZFd4SmpTZGw0?oc=5" target="_blank">Chromosome level genome assembly and full-length transcriptome of blacktip trevally ( Caranx heberi</a>  <font color="#6f6f6f">Nature</font>

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Full-Length transcriptome assembly and SSR marker development for Spinibarbus hollandi using PacBio SMRT sequencing
Naturegeneral

Full-Length transcriptome assembly and SSR marker development for Spinibarbus hollandi using PacBio SMRT sequencing

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1aUHJzbHp5SFJVNDlTcl9SNk42c0VDSW5qRjJvbHVEZkxwWmlVNkVudGN6S2xjS2phUmtrLTFYaUNIWHR5UUEtdm5FQlZPNUwweG52UjlHSTh5bzdjeGdR?oc=5" target="_blank">Full-Length transcriptome assembly and SSR marker development for Spinibarbus hollandi using PacBio SMRT sequencing</a>  <font color="#6f6f6f">Nature</font>

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Full-length transcriptome sequencing from multiple tissues of duck, Anas platyrhynchos
Naturegeneral

Full-length transcriptome sequencing from multiple tissues of duck, Anas platyrhynchos

<a href="https://news.google.com/rss/articles/CBMiXkFVX3lxTFBqNHdvQjU4d0Q4X1RKT3RvVGNKaG1qNnZhUk5pdU9yLWFUYWtJSlNubjlrRUpnVjdMNW40WndSMGIzb0k0Vko4WjVwWGNCaURWNjJEc3ZKMy1OTG9RRlE?oc=5" target="_blank">Full-length transcriptome sequencing from multiple tissues of duck, Anas platyrhynchos</a>  <font color="#6f6f6f">Nature</font>

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Full-length transcriptome sequencing of Arabidopsis plants provided new insights into the autophagic regulation of photosynthesis
Naturegeneral

Full-length transcriptome sequencing of Arabidopsis plants provided new insights into the autophagic regulation of photosynthesis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE92cFNIc2E1N1hQdmtqcV92U21vQ1U2ZGRfcUlwWEhZME9vQk5vSkRhTjZKTmlPVDd5dWVDOWR0SzFoa3c5NDhtZWU4Mi1CT3l2NGlMbVVNVUZZbEg2OHRZ?oc=5" target="_blank">Full-length transcriptome sequencing of Arabidopsis plants provided new insights into the autophagic regulation of photosynthesis</a>  <font color="#6f6f6f">Nature</font>

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Full-length transcriptome analysis of a bloom-forming dinoflagellate Scrippsiella acuminata (Dinophyceae)
Naturegeneral

Full-length transcriptome analysis of a bloom-forming dinoflagellate Scrippsiella acuminata (Dinophyceae)

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBzcl9XSE5hYkF2eUc4N1FySklqd0dLMDg0Z2dTVzk1bDhyb0tHNE5EYVhfVExMV2VfbzFYX0dxNEdmSjdjRnlNZ2V1dDdBODh5Q3VmMFJGRDA1RXhIMnVz?oc=5" target="_blank">Full-length transcriptome analysis of a bloom-forming dinoflagellate Scrippsiella acuminata (Dinophyceae)</a>  <font color="#6f6f6f">Nature</font>

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Transcriptome analysis reveals cell cycle-related transcripts as key determinants of varietal differences in seed size of Brassica juncea
Natureworld

Transcriptome analysis reveals cell cycle-related transcripts as key determinants of varietal differences in seed size of Brassica juncea

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1jeHBZdkVkNU1tR0E4NXBDalBKampkWE9yd2stb05YWTd4UmtzbXIwRFJhSG5sYkVtcmkzbm1ud0ZVRjZCTXI1R05kQVJ2ZndTYTlmUG8xSnVRbjRLRDlr?oc=5" target="_blank">Transcriptome analysis reveals cell cycle-related transcripts as key determinants of varietal differences in seed size of Brassica juncea</a>  <font color="#6f6f6f">Nature</font>

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Transcriptome of rat subcortical white matter and spinal cord after spinal injury and cortical stimulation
Naturegeneral

Transcriptome of rat subcortical white matter and spinal cord after spinal injury and cortical stimulation

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFAwbEZHMldkOTYzU2VRZ0tJVGxhNm95WHBEMXIzY3hIWTlUVzVhVURQbTlPX1RLTmhXa3U1cnlhZFNIek1tbHJoUHAyWEZEX2dRTE5feEhMUTU4cjZFbmw0?oc=5" target="_blank">Transcriptome of rat subcortical white matter and spinal cord after spinal injury and cortical stimulation</a>  <font color="#6f6f6f">Nature</font>

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Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus
Naturegeneral

Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE13Z0NqREFBNTdnd0dvZ0doanVmRVEzUnBEaEZ6a2tmeXJSNXhfZkI0OVZ6M0RqYkdsVFluMHdrclBKNjR2bXBpczhMbzBoMTdqTnN2THRkNUNOMkMwM0E4?oc=5" target="_blank">Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus</a>  <font color="#6f6f6f">Nature</font>

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Smart-seq2 for sensitive full-length transcriptome profiling in single cells
Naturegeneral

Smart-seq2 for sensitive full-length transcriptome profiling in single cells

<a href="https://news.google.com/rss/articles/CBMiVEFVX3lxTE9zbkJhUEtqZnlTeWdsLW43QmVDRFpNTDlRWko0Z25fYWZ4NU0zQ2ZjbGhDVU5tYVo4N1hLeVhBaVN3WmNLU05fR2EtZEhTUEdFdHdTUA?oc=5" target="_blank">Smart-seq2 for sensitive full-length transcriptome profiling in single cells</a>  <font color="#6f6f6f">Nature</font>

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Polyploidy, the Nucleotype, and Novelty: The Impact of Genome Doubling on the Biology of the Cell
The University of Chicago Press: Journalsgeneral

Polyploidy, the Nucleotype, and Novelty: The Impact of Genome Doubling on the Biology of the Cell

<a href="https://news.google.com/rss/articles/CBMiaEFVX3lxTE82N1laM3JuLV9POGRQempabVRla3h0UUZnVzZxOHVWVXR1VGNOV1NkWHdJNVRkdXpwR29KUWIxV1ZWNmpieVVyUFJkNU9TRDJYaXFCWUNHak1namZrVzBIMzlhM0ZMSjdI?oc=5" target="_blank">Polyploidy, the Nucleotype, and Novelty: The Impact of Genome Doubling on the Biology of the Cell</a>  <font color="#6f6f6f">The University of Chicago Press: Journals</font>

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The expanding implications of polyploidy | Journal of Cell Biology
Rockefeller University Pressgeneral

The expanding implications of polyploidy | Journal of Cell Biology

<a href="https://news.google.com/rss/articles/CBMilgFBVV95cUxPSDBLUWkyTXFYOHhVMVRIRWt6WGR4N1YwR19DRmZlYlNRdmZjY1VwUW9OUXV0cUZpc0tnS1lQZHZOdkwtU1NRdFg4bWxFMlRkeWJ5WTdYdWFOd2cxWWd3LWNUcEFodS0xVjh6endTS3Z5UFMyLTg4azlPSDVZd1NtOVUwNGdMQ0tJemhpNFloZE5PTm5ZWkE?oc=5" target="_blank">The expanding implications of polyploidy | Journal of Cell Biology</a>  <font color="#6f6f6f">Rockefeller University Press</font>

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Full-length transcriptome assembly from RNA-Seq data without a reference genome
Naturegeneral

Full-length transcriptome assembly from RNA-Seq data without a reference genome

<a href="https://news.google.com/rss/articles/CBMiUkFVX3lxTFBPOElmNjFnalFQVU84MUFUMFhqckhCcGNsZjdTV0xkaktrSGhSd3RPdTZQQ0pwVlNFZ1FFYm90OTNjNFZlRTBJQi1tLVRjQ1V6aWc?oc=5" target="_blank">Full-length transcriptome assembly from RNA-Seq data without a reference genome</a>  <font color="#6f6f6f">Nature</font>

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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
Natureworld

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

<a href="https://news.google.com/rss/articles/CBMiVkFVX3lxTE9wWm4yZ2xvX0RtdEJzeG0wbHFsT0pXQW5Ea0xxdTJuOHloRVFqa3Ztc1pHZUpEbWZFUFkzanBjdXVraER5UGFobnlTQVg2U19qT0xMNlF3?oc=5" target="_blank">Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs</a>  <font color="#6f6f6f">Nature</font>

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"Transcriptome size matter" — Live Google News Trends & Headlines