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Category:All HeadlinesWorld & GeopoliticsMarkets & EconomyTech & AIPoliticsSearch results for: "Re-analysis of single-cel" (30 stories)

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scMEDAL: interpretable single-cell transcriptomics analysis with batch effect visualization via deep mixed-effects autoencoder
Lead StoryNaturegeneral
Jun 2

scMEDAL: interpretable single-cell transcriptomics analysis with batch effect visualization via deep mixed-effects autoencoder

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE0taTFvZEpsQjlKcnVIdVVXMDUtRE51Qzd4RE1XNWMxYkFsMTRmcXc1VjdjdXlxT0s3UGpkMWZRQ3BUZ1haUy1oXzAxdERJempxanN0em9xUnJqNVhVWjJZ?oc=5" target="_blank">scMEDAL: interpretable single-cell transcriptomics analysis with batch effect visualization via deep mixed-effects autoencoder</a>  <font color="#6f6f6f">Nature</font>

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Search Results for "Re-analysis of single-cel"

Updated every 3 minutes via FreeNewsApi, GNews, Currents API & Google News

29 stories displayed
Single-cell mapping of diabetic foot ulcers: mechanistic axes and therapeutic targets
Frontiersgeneral

Single-cell mapping of diabetic foot ulcers: mechanistic axes and therapeutic targets

<a href="https://news.google.com/rss/articles/CBMijgFBVV95cUxPeWg3MHU5M3RiaFZHVGRyS2p3U1B1c2h3MzUxOVFIdjR0MWVpZVVDUUFNVmRvbHZab25uemVmVEp5QTZTbEM2SUJEdGF5YUIzUjVwckVUbllwTkczZG9oblNxdVIzb1RRalJPYUtDdmxaVEJzSFowUGM3RVJnSkl2SkFpcEFqMVBzWHRqZ2pR?oc=5" target="_blank">Single-cell mapping of diabetic foot ulcers: mechanistic axes and therapeutic targets</a>  <font color="#6f6f6f">Frontiers</font>

Re-analysis of single-cell transcriptomics reveals a critical role of TNS1 gene in driving contractile VSMC transdifferentiation into macrophage-like SMC and atherosclerotic plaque instability
Wiley Online Librarygeneral

Re-analysis of single-cell transcriptomics reveals a critical role of TNS1 gene in driving contractile VSMC transdifferentiation into macrophage-like SMC and atherosclerotic plaque instability

<a href="https://news.google.com/rss/articles/CBMia0FVX3lxTE9ZbWRRSFhoeWtnNzZXalFTZkdNNjhxb09GNG42TGNPVTdlTGdDMVZoTEJGQjNvNGJta3NYbFpPX3pqWGFIeUVxVTkxSHByWjRDWmdsOEhZa3g5NjVjOTRTd0JNM1JuaTJDS0sw?oc=5" target="_blank">Re-analysis of single-cell transcriptomics reveals a critical role of TNS1 gene in driving contractile VSMC transdifferentiation into macrophage-like SMC and atherosclerotic plaque instability</a>  <font color="#6f6f6f">Wiley Online Library</font>

Integrative analysis of single-cell RNA sequencing, bulk RNA sequencing, and proteomic data identified NOTCH3 as a hub gene contributing to human intervertebral disc fibrosis
Naturegeneral

Integrative analysis of single-cell RNA sequencing, bulk RNA sequencing, and proteomic data identified NOTCH3 as a hub gene contributing to human intervertebral disc fibrosis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE15Z2xpR2x3RFEyRlM0SVowS2JCRDBCS3J2THNlUVpBaV9vdnJPa2loTkQ3aUhpUVZQaDEtTV91TFlUSTVkZF9VRTRiZEg0SWdxTFhmZHQyZk5iQWYtTkRN?oc=5" target="_blank">Integrative analysis of single-cell RNA sequencing, bulk RNA sequencing, and proteomic data identified NOTCH3 as a hub gene contributing to human intervertebral disc fibrosis</a>  <font color="#6f6f6f">Nature</font>

Reanalysis of single-cell RNA sequencing data does not support herpes simplex virus 1 latency in non-neuronal ganglionic cells in mice
ASM Journalsgeneral

Reanalysis of single-cell RNA sequencing data does not support herpes simplex virus 1 latency in non-neuronal ganglionic cells in mice

<a href="https://news.google.com/rss/articles/CBMiY0FVX3lxTE9ZNElYd1o0VTBJaWF0bkNzQ3h3elZycUxCU0lJbTY3ZTE4Y0NTZWVSNmRJdHQyNXZzdDJxT0h0bHl1XzlyX1hhR3U1MVh6d0YxemNCZkpuSEFYNXB3dG5OTjg2SQ?oc=5" target="_blank">Reanalysis of single-cell RNA sequencing data does not support herpes simplex virus 1 latency in non-neuronal ganglionic cells in mice</a>  <font color="#6f6f6f">ASM Journals</font>

DaniocellDesktop: for Interactive Reanalysis of Wild-Type Zebrafish Single-Cell Genomic Data
Sage Journalsgeneral

DaniocellDesktop: for Interactive Reanalysis of Wild-Type Zebrafish Single-Cell Genomic Data

<a href="https://news.google.com/rss/articles/CBMibkFVX3lxTE5nTmZRa0Q1dDZJR3NvdTlmckhlaFRyNzREY3ZUUEFXZ21sdHZGNkhWejJzM0ZMZ0dBR2c1QXBtdVRqWm9UT296c3ZLSVNhV3JlZ2lFSlhKLWZ6MjVZMXZwb1ZFTS1DOEF3NkpfQ3VB?oc=5" target="_blank">DaniocellDesktop: for Interactive Reanalysis of Wild-Type Zebrafish Single-Cell Genomic Data</a>  <font color="#6f6f6f">Sage Journals</font>

Multimodal single cell analyses reveal gene networks of planarian stem cell differentiation
Naturegeneral

Multimodal single cell analyses reveal gene networks of planarian stem cell differentiation

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBHbnE0YzE1V084ZUxrdnVwY0puZFRqUk9IWkNWb1hFaW9WNjMxSF9lTXk4dU5FU0YyOGI1TXUwcFdMWHNPZVVGUTQ3SlRoeXAxUVBxVnZyZXVOeVFKbW5z?oc=5" target="_blank">Multimodal single cell analyses reveal gene networks of planarian stem cell differentiation</a>  <font color="#6f6f6f">Nature</font>

A systematic overview of single-cell transcriptomics databases, their use cases, and limitations
Frontiersgeneral

A systematic overview of single-cell transcriptomics databases, their use cases, and limitations

<a href="https://news.google.com/rss/articles/CBMilwFBVV95cUxQRzZTc1RVWmhPQy01TFcxSzYxQmJJbEoyYXpOcE1iYmU4NEdUS2o4Q0NsVmJaZnM3SVVlTzJQamtLVUE1WTNzby1qekdSLVdkbHJ5MmhEcnlWZ213akctZGliLXFiX284Ymo2UGNuVmZDeU1FZEJmdnd3ZUNJbWZpVkZvOEdUN1EwYnZIMWxMdWJkUjk2QmhJ?oc=5" target="_blank">A systematic overview of single-cell transcriptomics databases, their use cases, and limitations</a>  <font color="#6f6f6f">Frontiers</font>

Enabling scalable single-cell transcriptomic analysis through distributed computing with Apache spark
Naturegeneral

Enabling scalable single-cell transcriptomic analysis through distributed computing with Apache spark

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFB2ZE5obEs2ZUZnY0lVczBDWXVpRjF6YVJpT3FiZWk1MjRKZWlkdUtFMWxyQmd6a0owNkNKdFM4UVQ5c3BxanUzY3g0TnQxS0xKMlh0NmlqV295MGwzSl9B?oc=5" target="_blank">Enabling scalable single-cell transcriptomic analysis through distributed computing with Apache spark</a>  <font color="#6f6f6f">Nature</font>

High-resolution single-cell RNA-seq data and heterogeneity analysis of human ESCs and ffEPSCs
Naturegeneral

High-resolution single-cell RNA-seq data and heterogeneity analysis of human ESCs and ffEPSCs

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1kOHloWDBBeVlkZnNGcmxZYVp0RHkxNTlsNlhLR2l0bkVpYXo0U3kwUG9DSGJrUUZ4TmdXSGpoYm1RWlpLbWdsYkQ3YzRSbW8tZ3NSdVo3MERvczVqU2hz?oc=5" target="_blank">High-resolution single-cell RNA-seq data and heterogeneity analysis of human ESCs and ffEPSCs</a>  <font color="#6f6f6f">Nature</font>

CASi: A framework for cross-timepoint analysis of single-cell RNA sequencing data
Naturegeneral

CASi: A framework for cross-timepoint analysis of single-cell RNA sequencing data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE54Nm9Nc3ZwT1pWM19yb245V2hFNUoyZUJnTHZBT2RZZzNNNndIQmNvODc5djZZX3JRRmVKV3hSZ090SlVlQlBTTWdoczdBeHJETXNYNEZNc0pCNlVoZU5B?oc=5" target="_blank">CASi: A framework for cross-timepoint analysis of single-cell RNA sequencing data</a>  <font color="#6f6f6f">Nature</font>

ShIVA: a user-friendly and interactive interface giving biologists control over their single-cell RNA-seq data
Naturegeneral

ShIVA: a user-friendly and interactive interface giving biologists control over their single-cell RNA-seq data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBBNjNrcFUybHBULXlJMXVma1VBTEpNU1pBT0tlcWdnNUlHdG9PN0xJM1BZYnljVzI1c184VGJmeW9YYnV5bU9hZUR2NjJqWTNYc2RNQlEzV1REUzg0Vld3?oc=5" target="_blank">ShIVA: a user-friendly and interactive interface giving biologists control over their single-cell RNA-seq data</a>  <font color="#6f6f6f">Nature</font>

Scarf enables a highly memory-efficient analysis of large-scale single-cell genomics data
Naturegeneral

Scarf enables a highly memory-efficient analysis of large-scale single-cell genomics data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1VbWhpZ2xrUGNRWFktMDU5LUNBU3NxYXpGUEppbmNrMFF1Wm5qeHdoTi1tUk5fenhlY2I0VTN5TjhfRmdyenJodXZaYzJOeUFWNzRSLW1fTDNTdmQxTVI0?oc=5" target="_blank">Scarf enables a highly memory-efficient analysis of large-scale single-cell genomics data</a>  <font color="#6f6f6f">Nature</font>

Scanpro is a tool for robust proportion analysis of single-cell resolution data
Naturegeneral

Scanpro is a tool for robust proportion analysis of single-cell resolution data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBZd0VlMWEtanBLelQ5QWoxNDE1Z1NubWFKWUY2NmVTcF9CaGhxbjUwcmpvcjVwaXM5eFdVQVRKdkEtWGowb2JfS28tOHRaSm5FY0UxQnJGUEZDdzd6cERr?oc=5" target="_blank">Scanpro is a tool for robust proportion analysis of single-cell resolution data</a>  <font color="#6f6f6f">Nature</font>

Single-cell analysis reveals immune cell abnormalities underlying the clinical heterogeneity of patients with systemic sclerosis
Natureworld

Single-cell analysis reveals immune cell abnormalities underlying the clinical heterogeneity of patients with systemic sclerosis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFAxLTFxZTBLdkxwaE83cGs2SEZkTVh0a2h2NHEtbkF0RWFEd3BGNUVmNWw4VEJKYzNKYXZ4YlJTZnY3bkxvT21TX3N0R2l6cW9WUjBOdnFEd0szcmpqMGww?oc=5" target="_blank">Single-cell analysis reveals immune cell abnormalities underlying the clinical heterogeneity of patients with systemic sclerosis</a>  <font color="#6f6f6f">Nature</font>

Confronting false discoveries in single-cell differential expression
Naturegeneral

Confronting false discoveries in single-cell differential expression

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5OU3BMTXktUW50Tzl1YXR4M1VHMldtQlpLUGRkTWp5Q0N0ajZfTjRIN3dYMWdXalRneWR4VzRELUJjM09yX1ZaUER6NlhGTldRNGtzRUZkeWZ2dG1BS05F?oc=5" target="_blank">Confronting false discoveries in single-cell differential expression</a>  <font color="#6f6f6f">Nature</font>

High-throughput and high-accuracy single-cell RNA isoform analysis using PacBio circular consensus sequencing
Naturegeneral

High-throughput and high-accuracy single-cell RNA isoform analysis using PacBio circular consensus sequencing

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5DejNGU3ZQU2lXX3QzVUoyM25iWmxsT1Y0R3N4aFdEdF9Udzd2b2FEdE5BaE84MmNLZHZoWUZBVWdaNzhzb0pqYlU0UDdoZ1lOTmtSckJvZWJPcUo2eElR?oc=5" target="_blank">High-throughput and high-accuracy single-cell RNA isoform analysis using PacBio circular consensus sequencing</a>  <font color="#6f6f6f">Nature</font>

Which single-cell analysis tool is best? Scientists offer advice
Naturegeneral

Which single-cell analysis tool is best? Scientists offer advice

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1mMjF0bzc5bV9wSm4zMEdDQjFmN2tVTzUzWU1IRVVOaTJ5bGh4eDVzWlUxUTY4RTYxTm4zS3NEQ2Q2c2U0blQ0WERUbmxHYm9YZ3BvS1puUVpGSDUtN1dr?oc=5" target="_blank">Which single-cell analysis tool is best? Scientists offer advice</a>  <font color="#6f6f6f">Nature</font>

Improving reproducibility of differentially expressed genes in single-cell transcriptomic studies of neurodegenerative diseases through meta-analysis
Naturegeneral

Improving reproducibility of differentially expressed genes in single-cell transcriptomic studies of neurodegenerative diseases through meta-analysis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE94QlZJcWZqZzYwU0VTeDFWaTVZZURsdkZHY25kVTUyMGdTVUtTaGVHWURCTGtCZjNKb1dwenlpQnZaU1g0OTFqN2pua1huM2hDSk1oYWlrZ3NNQVI4NnBz?oc=5" target="_blank">Improving reproducibility of differentially expressed genes in single-cell transcriptomic studies of neurodegenerative diseases through meta-analysis</a>  <font color="#6f6f6f">Nature</font>

Orthologous marker groups reveal broad cell identity conservation across plant single-cell transcriptomes
Naturegeneral

Orthologous marker groups reveal broad cell identity conservation across plant single-cell transcriptomes

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE4taHh1RGEybi1sVG1FTmtreVN4NTNSeGV1bWU2WFFJQk8wV2RvVC1lbTZFY0NKdHlmUVRHZGdwUE1PWm9mbW1hT2NaYWJRcklDbkluOXVxNUhqSWZKbllN?oc=5" target="_blank">Orthologous marker groups reveal broad cell identity conservation across plant single-cell transcriptomes</a>  <font color="#6f6f6f">Nature</font>

Single-cell transcriptomic and genomic changes in the ageing human brain
Naturetech

Single-cell transcriptomic and genomic changes in the ageing human brain

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE4tTkxuaENKakdvV1Q0UE5wSV80SkZyVmV2a29pZ2VXNHNPUVhvRnZpckVvQWpTWEo3ZmhVRnZKVFl6aXVYTDhCdUVpMHNIZURFbEl2N2NBM2ZFX2laR3Fr?oc=5" target="_blank">Single-cell transcriptomic and genomic changes in the ageing human brain</a>  <font color="#6f6f6f">Nature</font>

An integrated single-cell transcriptomic dataset for non-small cell lung cancer
Natureworld

An integrated single-cell transcriptomic dataset for non-small cell lung cancer

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBWVWFFYVhfRGxmOWx4UkNfZC1lemxacWM3eVVHblJsZS15d1FxWVYzNXRrRGFTd2JvaTZJVWUwcXcxUFJ3Ni04bWxzS0s5MVBFdFJQMkxfdGVmMXRidWxj?oc=5" target="_blank">An integrated single-cell transcriptomic dataset for non-small cell lung cancer</a>  <font color="#6f6f6f">Nature</font>

Interpretation of T cell states from single-cell transcriptomics data using reference atlases
Naturegeneral

Interpretation of T cell states from single-cell transcriptomics data using reference atlases

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5TWEFCMGRVQVhUa0paTWtpUW9hQW5wVzEzbFZScl95TlItbkJaRGd0eDdrR0ZmNjY2NEpaNWwwT1FxeUQwa0ZXYklIWnRUZ1dic3JyclpZM19JNFBreFdr?oc=5" target="_blank">Interpretation of T cell states from single-cell transcriptomics data using reference atlases</a>  <font color="#6f6f6f">Nature</font>

Best practices for differential accessibility analysis in single-cell epigenomics
Naturegeneral

Best practices for differential accessibility analysis in single-cell epigenomics

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5vVTRmNUxuQzBCUTBCb25kSEloNThBbUdIMC1NV2JXQkFSN2NfemtPbm9YZzBmSGlEZGlaMlBLMlYtWEl0WTRrUTl5eDBjRDdMN0V1cWR6aTlZaHduZlNn?oc=5" target="_blank">Best practices for differential accessibility analysis in single-cell epigenomics</a>  <font color="#6f6f6f">Nature</font>

Biological process activity transformation of single cell gene expression for cross-species alignment
Naturegeneral

Biological process activity transformation of single cell gene expression for cross-species alignment

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE10ZGU5MHZCZnFKMXRUZmJfQUVEcmNBOHBhR1RhNXh6UzUwYU9VUkVwY3BnWFc1RDA0RklBYUlTVVgtTFUzaTVZcGNIb2pNa1p4RkEzUGZBeXVZc3JVVVY0?oc=5" target="_blank">Biological process activity transformation of single cell gene expression for cross-species alignment</a>  <font color="#6f6f6f">Nature</font>

Single-cell transcriptomic analysis reveals tumor-immune determinants of lymph node colonization and progression in thyroid cancer
Science | AAASworld

Single-cell transcriptomic analysis reveals tumor-immune determinants of lymph node colonization and progression in thyroid cancer

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE0wdkJiQlNLSXRpQmplVWF3ZTBjeG5fZ0VyMVo5d0lSSmlhUUNYMnlXS0pFVTVFaEhYUzRRcE1zVk5aRFZoXzlJeDNiMzlLSXAycGdub2Z2NUtuX011eHpR?oc=5" target="_blank">Single-cell transcriptomic analysis reveals tumor-immune determinants of lymph node colonization and progression in thyroid cancer</a>  <font color="#6f6f6f">Science | AAAS</font>

Single-cell resolution characterization of myeloid-derived cell states with implication in cancer outcome
Naturegeneral

Single-cell resolution characterization of myeloid-derived cell states with implication in cancer outcome

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE15UHJkOTZRcW1RdkZ0ZXZHRU9EVzdqUTV5RG9DRzg0VWJxcFpURXhCYnJWMWtHTUxmakdkR3ljV3FCZ2hqbC1oRW00TWRhalRVLUdnZ3g3Z3VyQXhtSWpz?oc=5" target="_blank">Single-cell resolution characterization of myeloid-derived cell states with implication in cancer outcome</a>  <font color="#6f6f6f">Nature</font>

Single-cell foundation models: bringing artificial intelligence into cell biology | Experimental & Molecular Medicine
Natureworld

Single-cell foundation models: bringing artificial intelligence into cell biology | Experimental & Molecular Medicine

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9ULWpyOWNoWWRMZU8zS2wydHQyZ3FTcW9xc1NScDNCVFFRcERYOWhhTkNqUWJJcEdwSkpoWEg5U1Q4d1E2d3NZSDI3YnBNeW5NcGZGb09SQXc3a3FUeUdR?oc=5" target="_blank">Single-cell foundation models: bringing artificial intelligence into cell biology | Experimental & Molecular Medicine</a>  <font color="#6f6f6f">Nature</font>

Facilitate integrated analysis of single cell multiomic data by binarizing gene expression values
Naturegeneral

Facilitate integrated analysis of single cell multiomic data by binarizing gene expression values

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5sRUZ2Z2kxS1MzaHhCRXJTaDlKenNYTXh1a0s0TGZSTm5DSzlEVmVIX3B0ZkxJYlpUMTJyQkZqcGVueG5nbjNmWERQRFM4MlltYkY1RTZhY3REeGlrOHQ0?oc=5" target="_blank">Facilitate integrated analysis of single cell multiomic data by binarizing gene expression values</a>  <font color="#6f6f6f">Nature</font>

Single-cell analysis of psoriasis resolution demonstrates an inflammatory fibroblast state targeted by IL-23 blockade
Naturegeneral

Single-cell analysis of psoriasis resolution demonstrates an inflammatory fibroblast state targeted by IL-23 blockade

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBkUWw2LWl5cnluenNBTENhRnB2VURlQTlFSXRncnEwMkkyaFZiWHNHNGFsYzBTNURoU0ZnaVlUdG9MM2ZtemUtUW1ERkpKelhQa1dRTHE4aWx3ZnZZaVB3?oc=5" target="_blank">Single-cell analysis of psoriasis resolution demonstrates an inflammatory fibroblast state targeted by IL-23 blockade</a>  <font color="#6f6f6f">Nature</font>

"Re-analysis of single-cel" — Live Google News Trends & Headlines