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Category:All HeadlinesWorld & GeopoliticsMarkets & EconomyTech & AIPoliticsSearch results for: "QuPath: Open source softw" (30 stories)

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LazySlide: accessible and interoperable whole-slide image analysis
Lead StoryNaturegeneral
Mar 20

LazySlide: accessible and interoperable whole-slide image analysis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5Pa2RJUWdnT2RTZWJCaWpIVDRTVGhkVjIwMTAxbldUallLbkZSZGtTdjhNVEVaQXEzdFBGbjZEb0U1WVNoVy1yOFdiblBGa1JoMFFvdHE3LW9TbTRoQ1FV?oc=5" target="_blank">LazySlide: accessible and interoperable whole-slide image analysis</a>  <font color="#6f6f6f">Nature</font>

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Search Results for "QuPath: Open source softw"

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29 stories displayed
QuPath: Open source software for digital pathology image analysis - Scientific Reports
Naturetech

QuPath: Open source software for digital pathology image analysis - Scientific Reports

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBfVnZDbGtvQ0p5YnU3eGZ4LUZ2YUdtVHFQQldMVVZzc1VfU0hsa3QxTXNSWkhYa1JZUUlrendET3JCUmdvUU54RnhvX20tYURQYWUxaW5yNzNxdExRUEdB?oc=5" target="_blank">QuPath: Open source software for digital pathology image analysis - Scientific Reports</a>  <font color="#6f6f6f">Nature</font>

“Tonga”: A Novel Toolbox for Straightforward Bioimage Analysis
Frontierstech

“Tonga”: A Novel Toolbox for Straightforward Bioimage Analysis

<a href="https://news.google.com/rss/articles/CBMimAFBVV95cUxNVmN4Tm1hX3g0UVJLQXFRTlRidElxREswY3VZR3R3aHR4RThNSTZNRVRLTDRkTlZtZEhidkFGUzM3UThpQW4wZXQ2TkhVdTJuelBKRmJxUUR4TEZUYzhTalZfb0JMbmRoZjRYUEVZQjFGcUwxeEJndGJNSmVVTGVINDVPRWVMeFlGcVpWSFZoSDktZ0NrOVdCMw?oc=5" target="_blank">“Tonga”: A Novel Toolbox for Straightforward Bioimage Analysis</a>  <font color="#6f6f6f">Frontiers</font>

QuPath: Boosting Bioimage Analysis for Users & Developers
Chan Zuckerberg Initiativegeneral

QuPath: Boosting Bioimage Analysis for Users & Developers

<a href="https://news.google.com/rss/articles/CBMingFBVV95cUxNQjhQdDVWSTR5VVNzOVRDT0FzOUk5eFlHRTRjYUJ4YlY0dElfQUJ2THFLTlJzX05TaUgzbnFBUWduTWJmTFJpV1BnZ0RXSHlfV29heFl0dm9Sb3RfSFZtLTZzc1VoejgyMnMwQmVIM1Zkd254bGJTZlhsZG42UlhDR1d0MVd1bGRDUGlLNVNaUDBlaWc1RVc2R2NkVW05dw?oc=5" target="_blank">QuPath: Boosting Bioimage Analysis for Users & Developers</a>  <font color="#6f6f6f">Chan Zuckerberg Initiative</font>

A novel automated method for comprehensive renal cast quantification from rat kidney sections using QuPath
American Physiological Society Journalgeneral

A novel automated method for comprehensive renal cast quantification from rat kidney sections using QuPath

<a href="https://news.google.com/rss/articles/CBMid0FVX3lxTE1nVjVPZk9QS3hmNzhjM09KdEhDQXhvY0FncUxrZjdIMG9uNzVSNkZMZ2FBc3A0Qnp0WGpmZmtEeTRvRnp0bmJLZGpVaDhlU0NDQ0k1U29CUHVMRElCdDVEZlY2czhkXzlIZ1VFbkNMN1d0bUZpR2M0?oc=5" target="_blank">A novel automated method for comprehensive renal cast quantification from rat kidney sections using QuPath</a>  <font color="#6f6f6f">American Physiological Society Journal</font>

Application and Validation of Semiautomatic Quantification of Immunohistochemically Stained Sections for Low Cellular Tissue Such as Intervertebral Disc Using QuPath
Wiley Online Librarytech

Application and Validation of Semiautomatic Quantification of Immunohistochemically Stained Sections for Low Cellular Tissue Such as Intervertebral Disc Using QuPath

<a href="https://news.google.com/rss/articles/CBMia0FVX3lxTFB1M21JNVFTVFhtU3lRTWZjaHZhMzRwVDJwcTlCX09qc3lKdmNwSG1HRGM0QlpGNS1vbmxtdDJsYzdsOElFMmdyNndvUXFoSktMNUhFSUlyRE9PS1FROXdPTlR1N2JkNGxENGdV?oc=5" target="_blank">Application and Validation of Semiautomatic Quantification of Immunohistochemically Stained Sections for Low Cellular Tissue Such as Intervertebral Disc Using QuPath</a>  <font color="#6f6f6f">Wiley Online Library</font>

SCIP: A scalable, reproducible and open-source pipeline for morphological profiling of image cytometry and microscopy data
Wiley Online Librarygeneral

SCIP: A scalable, reproducible and open-source pipeline for morphological profiling of image cytometry and microscopy data

<a href="https://news.google.com/rss/articles/CBMibkFVX3lxTE8tdmRrUDZzQl81RDVlUG4xdDJkUjlsMkZlNl9hMGQ5bGpKNVppVXdiemtUV1JPSHlZYkNNU1RxYUJSLTdwTkdjVXg3bnNtMEpwNTBPUEZhd2wwa2JIc1ZOZThid0I3azNUNmpSZWZn?oc=5" target="_blank">SCIP: A scalable, reproducible and open-source pipeline for morphological profiling of image cytometry and microscopy data</a>  <font color="#6f6f6f">Wiley Online Library</font>

An open-source platform for structured annotation and computational workflows in digital pathology research
Naturegeneral

An open-source platform for structured annotation and computational workflows in digital pathology research

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5nYTdfWENLSFFsUjN5UV9nYWZpV2UyQm00dlFZQ1FNS0hvNnlHR0h3TnJEcUk4cUtrejJka3A3Q1BCMGxHNU5oaWttaHI5bXUtU1Z2OU9CWUQwZUo4LXBF?oc=5" target="_blank">An open-source platform for structured annotation and computational workflows in digital pathology research</a>  <font color="#6f6f6f">Nature</font>

Open and reusable deep learning for pathology with WSInfer and QuPath | npj Precision Oncology
Naturegeneral

Open and reusable deep learning for pathology with WSInfer and QuPath | npj Precision Oncology

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1iMXctNEtGY0NHZkRpSDUzNTV3SFJGYjVrbGphcmR2Q2JCeURudU1OUUtWNFVvR2VFNkRDTzJQdW14eERMRGEyZUg4bnZZM0xyN1JRdk9zc2x5emk2NDhN?oc=5" target="_blank">Open and reusable deep learning for pathology with WSInfer and QuPath | npj Precision Oncology</a>  <font color="#6f6f6f">Nature</font>

Tumour area infiltration and cell count in endoscopic biopsies of therapy-naive upper GI tract carcinomas by QuPath analysis: implications for predictive biomarker testing
Naturetech

Tumour area infiltration and cell count in endoscopic biopsies of therapy-naive upper GI tract carcinomas by QuPath analysis: implications for predictive biomarker testing

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE05WkJ6YWRiLXJXMmE4d3VqcjF4WHg3cUNkXy1YWmgzb1FINVE1S1hYN0xWSXo1WlNQMUNVbG9SdDZYellSc09sLTJqMDJacU91ekQ3VGx1Qkp5NkU1anF3?oc=5" target="_blank">Tumour area infiltration and cell count in endoscopic biopsies of therapy-naive upper GI tract carcinomas by QuPath analysis: implications for predictive biomarker testing</a>  <font color="#6f6f6f">Nature</font>

Software BreastAnalyser for the semi-automatic analysis of breast cancer immunohistochemical images
Naturetech

Software BreastAnalyser for the semi-automatic analysis of breast cancer immunohistochemical images

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFA1VW1JTjh6eF94OWNEazNXRTZFdXpSZmZaWWlwWGtmMjBlLWtzSUNQdkU1SzNFYWRGTGlpYS1TdVdZRUZPSFE3SHFUX1dubUJQYlNkS1F3dThFUHRpSWhv?oc=5" target="_blank">Software BreastAnalyser for the semi-automatic analysis of breast cancer immunohistochemical images</a>  <font color="#6f6f6f">Nature</font>

GelGenie: an AI-powered framework for gel electrophoresis image analysis
Naturetech

GelGenie: an AI-powered framework for gel electrophoresis image analysis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9YZ0tEN3lrYXdOTW84MW5IdUdnQ1NnVmN4elgtNW5uZk92VGpPZVZtYm5CTE9QVVEwLTg1c1dzajY2VGZ6RFZxTGRwYVV6cGdPc0hNcFUteDROYzZvUDg0?oc=5" target="_blank">GelGenie: an AI-powered framework for gel electrophoresis image analysis</a>  <font color="#6f6f6f">Nature</font>

An easy to use tool for the analysis of subcellular mRNA transcript colocalisation in smFISH data
Naturegeneral

An easy to use tool for the analysis of subcellular mRNA transcript colocalisation in smFISH data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1Xb2FPN1JtdlFDbjZISElaS3BtU0FfQ0RxLTZDZHppMWNXM3VFTURTTENlejNMQ1B4eENDOU9OYkd1Vy1OYms3QkMyQlNDSFRRcnZnMlZmcmw5OERyNWxN?oc=5" target="_blank">An easy to use tool for the analysis of subcellular mRNA transcript colocalisation in smFISH data</a>  <font color="#6f6f6f">Nature</font>

GrandQC: A comprehensive solution to quality control problem in digital pathology
Naturegeneral

GrandQC: A comprehensive solution to quality control problem in digital pathology

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5mM1Y4WEhlbXV6dmhWd3kzSFlMSnJPaGQwZTNHaG5fUXlBRGkyNy1WUFhxUk80SUVkdkpaeUlZejlVN0tvU043X2dXMXlJcmdncW11bVJXOTlfSmdiMlRR?oc=5" target="_blank">GrandQC: A comprehensive solution to quality control problem in digital pathology</a>  <font color="#6f6f6f">Nature</font>

Integrative whole slide image and spatial transcriptomics analysis with QuST and QuPath | npj Precision Oncology
Naturegeneral

Integrative whole slide image and spatial transcriptomics analysis with QuST and QuPath | npj Precision Oncology

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1BMnp2Tzhhd0FJNTBzS0NuM1d2ZjduSm1xZzZiQzQwWGRxX1p0RG5EejdXMVRtSGR2a2hSVldCbmpTM0paUUF1NG1WbnAxX0pGTW9YRHZXZEF3SUVWSkdF?oc=5" target="_blank">Integrative whole slide image and spatial transcriptomics analysis with QuST and QuPath | npj Precision Oncology</a>  <font color="#6f6f6f">Nature</font>

Spatial analysis by current multiplexed imaging technologies for the molecular characterisation of cancer tissues
Naturetech

Spatial analysis by current multiplexed imaging technologies for the molecular characterisation of cancer tissues

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1yaTRUeTZOVE1ORmJIVnh6ekJxWXNzb2FvOGNRLURYUy1pVk9QbVh0UTdFVk8wWE5tNndFY3BHRUhNMzBIQXoxaGVrLXNnbmxPeGxpNXc3M1p0V0VoWWNF?oc=5" target="_blank">Spatial analysis by current multiplexed imaging technologies for the molecular characterisation of cancer tissues</a>  <font color="#6f6f6f">Nature</font>

Multiparametric cellular and spatial organization in cancer tissue lesions with a streamlined pipeline
Naturegeneral

Multiparametric cellular and spatial organization in cancer tissue lesions with a streamlined pipeline

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE51LU5udmVTNE1ua3J5LXdvVHpJMTJFeENpcEF3TnFtbHdRVjNLeTFtVHVkSnBzWWRRMVJvTTZhUzltR0t4akJkQWdMeEF3dWdnNEM5UkRkeWViZjZ5cUlR?oc=5" target="_blank">Multiparametric cellular and spatial organization in cancer tissue lesions with a streamlined pipeline</a>  <font color="#6f6f6f">Nature</font>

Concordance in the estimation of tumor percentage in non-small cell lung cancer using digital pathology
Natureworld

Concordance in the estimation of tumor percentage in non-small cell lung cancer using digital pathology

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5rQzZqYzIxd2lkdDdHTXo1X3c0UkRNb1ozN0lPOHlvSE00NDVEU1MwVFJJWnNIWU9kSnVCVUF1VlY1RW5MWDgtSUNXZ2xXQkRJeFJjaVByRFZoUEw4c0FJ?oc=5" target="_blank">Concordance in the estimation of tumor percentage in non-small cell lung cancer using digital pathology</a>  <font color="#6f6f6f">Nature</font>

Semi-automated approaches for interrogating spatial heterogeneity of tissue samples
Naturegeneral

Semi-automated approaches for interrogating spatial heterogeneity of tissue samples

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9jRzJkc0hVWlFQbFVLdjlhOFBGczVzWldfbkE2RXNmSTJKUC1xalR5MkxZbmdvTDNoYjhpV1RnRmduVWJTMmZxdFV6SWUwSHdUc1MwS282Um9kWlo0aXlV?oc=5" target="_blank">Semi-automated approaches for interrogating spatial heterogeneity of tissue samples</a>  <font color="#6f6f6f">Nature</font>

Automating liver biopsy segmentation with a robust, open-source tool for pathology research: the HOTSPoT model
Naturegeneral

Automating liver biopsy segmentation with a robust, open-source tool for pathology research: the HOTSPoT model

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5CZW5jblpHeDVsbWZvSWhoUVYyU0RER0dLSzhtU3Z5a09yY3dZS1J4UkZnNlpoSk5JclFWQkNuT0FmTlMzZktwNlVxdlFkVWRmdlhOTFJCbVNmWlBjMFhB?oc=5" target="_blank">Automating liver biopsy segmentation with a robust, open-source tool for pathology research: the HOTSPoT model</a>  <font color="#6f6f6f">Nature</font>

Virtual alignment of pathology image series for multi-gigapixel whole slide images
Naturegeneral

Virtual alignment of pathology image series for multi-gigapixel whole slide images

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1FREI3OGM4cmtTU0tZWUN3S25DWDBCYjlKeW5XRXh0X2RoVm5RLXhKdDNWNE9keXVNQWhvNTVZNUN0THNwUlpaWEFFU01NV0ktTnlIcmFlcC1CQlhNZ1hJ?oc=5" target="_blank">Virtual alignment of pathology image series for multi-gigapixel whole slide images</a>  <font color="#6f6f6f">Nature</font>

Image analysis-based tumor infiltrating lymphocytes measurement predicts breast cancer pathologic complete response in SWOG S0800 neoadjuvant chemotherapy trial | npj Breast Cancer
Naturegeneral

Image analysis-based tumor infiltrating lymphocytes measurement predicts breast cancer pathologic complete response in SWOG S0800 neoadjuvant chemotherapy trial | npj Breast Cancer

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5jdG1BcUF1aE4tNl9NTTZLM2xmNWVreWFTUE1rd2hrT1hVMW1YMXc3ZUJiX2NJWnMzTGUwT2lKOVRYenhtY0gzS20xemR0c1U3T1gwSnFfOVkxc1hHaHFZ?oc=5" target="_blank">Image analysis-based tumor infiltrating lymphocytes measurement predicts breast cancer pathologic complete response in SWOG S0800 neoadjuvant chemotherapy trial | npj Breast Cancer</a>  <font color="#6f6f6f">Nature</font>

Quantitative benchmarking of nuclear segmentation algorithms in multiplexed immunofluorescence imaging for translational studies | Communications Biology
Natureworld

Quantitative benchmarking of nuclear segmentation algorithms in multiplexed immunofluorescence imaging for translational studies | Communications Biology

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBYRVRCVUE4amVUQk5xdUUxWkpfQldZWXlqd01hV2UzODI2a3l0emRkaXVDWXFRbGNBQ0FEc1dtQ2tqMjNsXy1yS0FhckRJRXpjVnV0R1ZITHA3NmdvMGRZ?oc=5" target="_blank">Quantitative benchmarking of nuclear segmentation algorithms in multiplexed immunofluorescence imaging for translational studies | Communications Biology</a>  <font color="#6f6f6f">Nature</font>

A perspective on FAIR quality control in multiplexed imaging data processing
Frontierstech

A perspective on FAIR quality control in multiplexed imaging data processing

<a href="https://news.google.com/rss/articles/CBMilwFBVV95cUxPVDBSdnMtQ2pLdDFYSHRMOFFuaGpjeEFBd2VTeEpDRmlsTEd1cWExa2FQdDhYNTc4bmlORG5xekJ0b0FhWVhEY09sNEJZTTg5RUUwaUtNQW5vb3VZdEluYkphZ1lNWlN3eGF6QW9Va2g0d1V6QU9kdFJ0Zk5kdmxyM1pMc0tmZ1FoN3M1bURMSVJhUlZMSFZJ?oc=5" target="_blank">A perspective on FAIR quality control in multiplexed imaging data processing</a>  <font color="#6f6f6f">Frontiers</font>

Artificial intelligence workflow quantifying muscle features on Hematoxylin–Eosin stained sections reveals dystrophic phenotype amelioration upon treatment
Naturetech

Artificial intelligence workflow quantifying muscle features on Hematoxylin–Eosin stained sections reveals dystrophic phenotype amelioration upon treatment

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE4xeklScWFyODliWUo2RFlmaTRlVUhrcDhVaTRBZXpsSjVra2R0QUctSXM0a0YzV3RRUjBhaGZUWC1GSlhnc1E1UDZQZG5hZUVqQ281ZTctV3I4ajZENnJJ?oc=5" target="_blank">Artificial intelligence workflow quantifying muscle features on Hematoxylin–Eosin stained sections reveals dystrophic phenotype amelioration upon treatment</a>  <font color="#6f6f6f">Nature</font>

LABKIT: Labeling and Segmentation Toolkit for Big Image Data
Frontiersgeneral

LABKIT: Labeling and Segmentation Toolkit for Big Image Data

<a href="https://news.google.com/rss/articles/CBMimAFBVV95cUxQVE1RX1FWVFExUjBGN3h3UHZWNlBubENwbUpBWDR3d2xhX1NKR0dmWWJMclM5TEFiNmUyam5oaTFMZFJsT3NoQWdXR01IUGYxUHh1WGh6WWk1LTBMN0doVGg0ck04ZUxOeUtXdGNiZEszV0RlRWJaeUhuaXhFN0E2WVJXa1EzMDVXOGUtWVk0V2xKWXd4eDJPMg?oc=5" target="_blank">LABKIT: Labeling and Segmentation Toolkit for Big Image Data</a>  <font color="#6f6f6f">Frontiers</font>

Proposal of an automated tumor-stromal ratio assessment algorithm and a nomogram for prognosis in early-stage invasive breast cancer
Wiley Online Librarygeneral

Proposal of an automated tumor-stromal ratio assessment algorithm and a nomogram for prognosis in early-stage invasive breast cancer

<a href="https://news.google.com/rss/articles/CBMiakFVX3lxTE1xeEpEbWk2QzRzeEM3NmxjQ3hXUjBoUkdYb21aSnRLaDFrWVFFcl9FckctbFZ1dzJBbHdidDkzRHVsNlY4Y1BvZjNqUi1JSElqekJ3cVJId0pFV3VzVVA0YXhxNlFleDZpM0E?oc=5" target="_blank">Proposal of an automated tumor-stromal ratio assessment algorithm and a nomogram for prognosis in early-stage invasive breast cancer</a>  <font color="#6f6f6f">Wiley Online Library</font>

Image Processing Filters for Grids of Cells Analogous to Filters Processing Grids of Pixels
Frontiersgeneral

Image Processing Filters for Grids of Cells Analogous to Filters Processing Grids of Pixels

<a href="https://news.google.com/rss/articles/CBMimAFBVV95cUxPU2FJMFhwaV94ZW1NdlpQQkpFN0dGbXI5QXdFNVFrWWN0djN3QUx4SHVHcmRoZFU2bjhQWDc3dXlYYnZDbE53aTRzWWV2MGdEUDR3bEJ3SHN1bnMwVHNtTFM5b1V5ZF8tMWI1MXZXTDY2RkNMeEh2bE9XVE5fcG45Z1hsTUFxZUZSRkVBSUpuYzRiaVNOX2JuZQ?oc=5" target="_blank">Image Processing Filters for Grids of Cells Analogous to Filters Processing Grids of Pixels</a>  <font color="#6f6f6f">Frontiers</font>

An open source automated tumor infiltrating lymphocyte algorithm for prognosis in melanoma
Naturegeneral

An open source automated tumor infiltrating lymphocyte algorithm for prognosis in melanoma

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBfdVh1SDZLWnFmRGZKNU9kQkVWZkk3QW1JaE5WejE4b05LSFh3eElyUEpMNXJfQkwxQ085eGJqekd0YVlFT21oQTJnVDRQcEdFMk00NTNyNTFhTDBIT29F?oc=5" target="_blank">An open source automated tumor infiltrating lymphocyte algorithm for prognosis in melanoma</a>  <font color="#6f6f6f">Nature</font>

PRAME expression in fibrosarcomatous dermatofibrosarcoma protuberans
Naturegeneral

PRAME expression in fibrosarcomatous dermatofibrosarcoma protuberans

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9OdG9OQTVpRFpvMlNlM05fb2tmeUFhTnl3cmtCUGowcndCVG9BUy1uMmk1R25DaC1XWnRxcUlCd2o0eF96VWh1eFpWcGY1Nl82OHBNT3luWmhtRHpsY25V?oc=5" target="_blank">PRAME expression in fibrosarcomatous dermatofibrosarcoma protuberans</a>  <font color="#6f6f6f">Nature</font>

"QuPath: Open source softw" — Live Google News Trends & Headlines