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Category:All HeadlinesWorld & GeopoliticsMarkets & EconomyTech & AIPoliticsSearch results for: "Genome-scale quantificati" (30 stories)

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Genome-scale metabolic modelling identifies vaginal microbiome members as potential probiotics
Lead StoryNaturegeneral
Jun 12

Genome-scale metabolic modelling identifies vaginal microbiome members as potential probiotics

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5PLUt5YUx3aGc4ZnlBWUpVVFU5alRISmJ2YUZrZ014aC1wbTNqdEhhMGhSS1hVeDVhQzBFVE9SZGpnREI1UUUxWmdoTFpOUG1GQmtBWTg0NHI5TGZFVEpv?oc=5" target="_blank">Genome-scale metabolic modelling identifies vaginal microbiome members as potential probiotics</a>  <font color="#6f6f6f">Nature</font>

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Search Results for "Genome-scale quantificati"

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29 stories displayed
Genome-scale quantification and prediction of pathogenic stop codon readthrough by small molecules
Naturegeneral

Genome-scale quantification and prediction of pathogenic stop codon readthrough by small molecules

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1zUDUyV0poZERBRkpQdy11WnVvRXluTloxYmJJeC05MXVoMFUtUDVraFUtdjZhUnZBRXVIZzR5clV3UWhrQ2UyMGw1LWtZSDNtZ19GMnhHdW1mZlVrR3dF?oc=5" target="_blank">Genome-scale quantification and prediction of pathogenic stop codon readthrough by small molecules</a>  <font color="#6f6f6f">Nature</font>

Genome‐scale Metabolic Modeling Guided Escherichia coli Engineering for De Novo Biosynthesis of Chrysanthemic Acid
Wiley & Sonsgeneral

Genome‐scale Metabolic Modeling Guided Escherichia coli Engineering for De Novo Biosynthesis of Chrysanthemic Acid

<a href="https://news.google.com/rss/articles/CBMifEFVX3lxTE9WYkMzTnpkT2ZQTjFYcEhCTUNTODV0Ni1KQnZTWkgtak1QOXRaSmF0c3JlUnpOaVU1LWFsdmRvYlU5ajVWOWl3NFBTS0IyM3VtT1gwVnlOZFQ3bThhdUo1a1BJSmdXY1RHRmhMV0FOVF9vZzcteUllcHBZWjQ?oc=5" target="_blank">Genome‐scale Metabolic Modeling Guided Escherichia coli Engineering for De Novo Biosynthesis of Chrysanthemic Acid</a>  <font color="#6f6f6f">Wiley & Sons</font>

Genome-scale requirements for dynein-based transport revealed by a high-content arrayed CRISPR screen
Rockefeller University Pressgeneral

Genome-scale requirements for dynein-based transport revealed by a high-content arrayed CRISPR screen

<a href="https://news.google.com/rss/articles/CBMinwFBVV95cUxPTEgzaUZqREdWSnc4MHZTWUd6TnhlcFpuZnNJTXlPeU9RR2M3LWJ2Sll6MVZqVnR3Ti1GdGpFeXRQZDhSeC0tLUZuNElHU0xYbUpXNjl0bVJKOWFvVTRjQWZmM3Y4MFNrZ0R1WmNtZ2V6UUhXQTlocjQydXdlQ3UxMzR0NzdQN0hENVFIWmVRVVZrUFVtU2gwbXZmMy1jWXc?oc=5" target="_blank">Genome-scale requirements for dynein-based transport revealed by a high-content arrayed CRISPR screen</a>  <font color="#6f6f6f">Rockefeller University Press</font>

Genome-scale transcriptome augmentation during Arabidopsis thaliana photomorphogenesis
Naturegeneral

Genome-scale transcriptome augmentation during Arabidopsis thaliana photomorphogenesis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBDajZEVVI4UzhIWjNXTFdzUWdGcTBidlQtNHMybGJFcWRaMlJYd3dLS1ZaRUlOb3Fac0xyZ0hnOWxCby05NUhGVVlyVlVrVkZsR2lYZzVySHRkTHdiNmVr?oc=5" target="_blank">Genome-scale transcriptome augmentation during Arabidopsis thaliana photomorphogenesis</a>  <font color="#6f6f6f">Nature</font>

Modeling tissue-specific Drosophila metabolism identifies high sugar diet-induced metabolic dysregulation in muscle at reaction and pathway levels
Naturegeneral

Modeling tissue-specific Drosophila metabolism identifies high sugar diet-induced metabolic dysregulation in muscle at reaction and pathway levels

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE82UDR1S28zaXdLb1lfV2VLZDA0MTY0YmVJQjNSMk9LM2wtb1NsakdlbHhtTW1ZaHBIakZCci1GZVJXdzJDQTR5YnNVMXVaeTFEeHJGTmstOFNta2lpaTVZ?oc=5" target="_blank">Modeling tissue-specific Drosophila metabolism identifies high sugar diet-induced metabolic dysregulation in muscle at reaction and pathway levels</a>  <font color="#6f6f6f">Nature</font>

Genome-scale CRISPR screens identify PTGES3 as a direct modulator of androgen receptor function in advanced prostate cancer
Natureworld

Genome-scale CRISPR screens identify PTGES3 as a direct modulator of androgen receptor function in advanced prostate cancer

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9QNEVoY0Z6OVJDb0lCNkJ2SElLZGRwbHpEZDNUdTVSUDB5WG9yWXVmTmZlLTJYQ0dkVkhyMFZBTWFERmxhX0lhMUIwNU9TYkgwdGNraC1nbVFjZTNxdWxZ?oc=5" target="_blank">Genome-scale CRISPR screens identify PTGES3 as a direct modulator of androgen receptor function in advanced prostate cancer</a>  <font color="#6f6f6f">Nature</font>

Benchmarking DNA foundation models for genomic and genetic tasks
Natureworld

Benchmarking DNA foundation models for genomic and genetic tasks

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBmTEVZTUpSQ3BqYm8zUnlpOGc1SE9mRGtZVXJiVm50SDk1UlFBbE0wakk3VG9WX0JTb2xYX1ZqcXFBTzZOSUtubmZVWjVTYlJkT1VtWmp2MS1vSG1zUDY4?oc=5" target="_blank">Benchmarking DNA foundation models for genomic and genetic tasks</a>  <font color="#6f6f6f">Nature</font>

Genome-scale proteome quantification by DEEP SEQ mass spectrometry
Naturegeneral

Genome-scale proteome quantification by DEEP SEQ mass spectrometry

<a href="https://news.google.com/rss/articles/CBMiVEFVX3lxTE04RTVSUk8xbmdvRmNDN1E5bFo3c0ZLdVNhc3hJb0hROFc1anNYOWJjTFhjZzNONTlDNjFuQUpHVTd5dktyYWE2TllKWHMxN1BXdFdTeA?oc=5" target="_blank">Genome-scale proteome quantification by DEEP SEQ mass spectrometry</a>  <font color="#6f6f6f">Nature</font>

A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells
Naturegeneral

A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFA5WE5xV2gxTkwyMXZ1QUVKUnlFTkFLS3dKY1NXZ2pmZ1dCVHhuRW9TM21QRml5V1VBdDdLX3FJTW9WNmFac0xsSVE1SUdPOVl3dVRURTlsWnBlWEFtSGFj?oc=5" target="_blank">A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells</a>  <font color="#6f6f6f">Nature</font>

Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors
Naturegeneral

Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5NUmJfZFNVZkRPZ3ZNWUFnNHJnMFgxZjYzSjhjRWFPOFhGbGdXalR6Y1RLSW00Mms1UzhXemY5WFZtXzhoOTRraFpjdWFUcWdwOWNWenprRkRzbzRJSmtj?oc=5" target="_blank">Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors</a>  <font color="#6f6f6f">Nature</font>

Characterization and visualization of tandem repeats at genome scale
Naturegeneral

Characterization and visualization of tandem repeats at genome scale

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9yeFJfeWFjSEMtdng0Qk9jZnY3QlphaUhkWlpkYnBnLW5sVGdTLXhnSm5yQk5UUG9QWmhEZ1dxV2pjRGNteDdSbGhZWUNIWHEwV2NUcmUwTkVnWndnZW04?oc=5" target="_blank">Characterization and visualization of tandem repeats at genome scale</a>  <font color="#6f6f6f">Nature</font>

Addressing genome scale design tradeoffs in Pseudomonas putida for bioconversion of an aromatic carbon source
Naturegeneral

Addressing genome scale design tradeoffs in Pseudomonas putida for bioconversion of an aromatic carbon source

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9iaTE4eU1VMExqWE1ibDVqWHJnNTBESC1naUt6WWJITzAwaFd3aFNTQnExN3ZsaUlQNDRYVmlVV0dhTUx4RktXRERzZUoxTlhVRVRNUFRIZjVWUmxfNEV3?oc=5" target="_blank">Addressing genome scale design tradeoffs in Pseudomonas putida for bioconversion of an aromatic carbon source</a>  <font color="#6f6f6f">Nature</font>

Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale
Naturegeneral

Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBBVmV5MmZzYzhDWmc1YkhDOXhDOWhuT29hcWM2Q3JTd19FTjJuN1V3SktoX3FnVWVzb3dqUDM4amw0aHJaWG1acVhjSGtUUl9aMkw4QW9UR3U0S2FCeFlV?oc=5" target="_blank">Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale</a>  <font color="#6f6f6f">Nature</font>

Genome-scale metabolic network reconstruction analysis identifies bacterial vaginosis-associated metabolic interactions
Naturegeneral

Genome-scale metabolic network reconstruction analysis identifies bacterial vaginosis-associated metabolic interactions

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9DZjZyVjVkUmFLaFMzV1lnclJZcUhhX25TbzlDSnFMZEVIU3YzUDBGT2RaVkFndVpyaUxhbGY0Rm1yeGh5MEg1OFY2aVVyTFRsRFBZUVlUX0FtVnBQSm9N?oc=5" target="_blank">Genome-scale metabolic network reconstruction analysis identifies bacterial vaginosis-associated metabolic interactions</a>  <font color="#6f6f6f">Nature</font>

Construction of multi-targeted CRISPR libraries in tomato to overcome functional redundancy at genome-scale level
Natureworld

Construction of multi-targeted CRISPR libraries in tomato to overcome functional redundancy at genome-scale level

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFB3aWdmX0l3cnBncDdJT05MNFdQZGplRnJMU3REZzA1eXg0Sk9BTFJUdDcyVlpnQVNhcHJ6WWJVdFdnWnlhbHJickllaDlza1FHZS1iblVobUpRdk0xM2NR?oc=5" target="_blank">Construction of multi-targeted CRISPR libraries in tomato to overcome functional redundancy at genome-scale level</a>  <font color="#6f6f6f">Nature</font>

Parallel genome-scale CRISPR-Cas9 screens uncouple human pluripotent stem cell identity versus fitness
Natureworld

Parallel genome-scale CRISPR-Cas9 screens uncouple human pluripotent stem cell identity versus fitness

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9qLURQRjhUa1pMcG5uQ0dNUmVlRFBzdXVTNHFVbUZvRjlFUlNGMmZDNlU5a042WTc3RkxEUjZvT25ramFSamdmdmNxVDZ3c3RMN18tZmJaUVRoZkNQQnJn?oc=5" target="_blank">Parallel genome-scale CRISPR-Cas9 screens uncouple human pluripotent stem cell identity versus fitness</a>  <font color="#6f6f6f">Nature</font>

Improving gene isoform quantification with miniQuant
Naturegeneral

Improving gene isoform quantification with miniQuant

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5tOEdFNjBpSXpTTC12eG90djFFRVFWdV9pMVVCNHhMd05KN3ppMDluVjlnbjNYQU5HNnlnQkszcHB6c1NkUkZKdlB4WVlLYW00WndETWdVY1BBb0FTMnJJ?oc=5" target="_blank">Improving gene isoform quantification with miniQuant</a>  <font color="#6f6f6f">Nature</font>

Genome-scale pan-cancer interrogation of lncRNA dependencies using CasRx
Naturegeneral

Genome-scale pan-cancer interrogation of lncRNA dependencies using CasRx

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1aNE9fb29lbG9xcnJuc0pweThHVU1BdWp2eHUyZHZ5cjhRWlUtZkZtQVRLTV96RUEyTHBjSlNCSjlWczB6eEU0T19ockx2bTdrZkpYT0IyTEZsdzQ3VVo0?oc=5" target="_blank">Genome-scale pan-cancer interrogation of lncRNA dependencies using CasRx</a>  <font color="#6f6f6f">Nature</font>

Genome-scale metabolic modeling of Aspergillus fumigatus strains reveals growth dependencies on the lung microbiome
Naturetech

Genome-scale metabolic modeling of Aspergillus fumigatus strains reveals growth dependencies on the lung microbiome

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9IR2wxUUZkT2lCTEN5eTYtNWl3LXRUMnB6Z1ItYmRrVUliUkFOSGlXTUljZFJWTzFlYnpWSHdKelM2ZTdKV1VmN3MydDhYRkJEVUNIZ05NWldYOVdfam0w?oc=5" target="_blank">Genome-scale metabolic modeling of Aspergillus fumigatus strains reveals growth dependencies on the lung microbiome</a>  <font color="#6f6f6f">Nature</font>

Integration of graph neural networks and genome-scale metabolic models for predicting gene essentiality
Naturegeneral

Integration of graph neural networks and genome-scale metabolic models for predicting gene essentiality

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE8ydV9JYmRMT05VWElDUTBUS3dFUEJTekpRaWRYSUxucEFPNjBraVQzSHlRM0g1VUdJM0Y0QVdBSnc5VHExZjU1ZkFWVkZ2YzNra2hSdHpKS0Y3NllCRHhJ?oc=5" target="_blank">Integration of graph neural networks and genome-scale metabolic models for predicting gene essentiality</a>  <font color="#6f6f6f">Nature</font>

Genome-scale DNA methylome and transcriptome profiling of midgut of Bombyx mori infected with BmCPV
Naturegeneral

Genome-scale DNA methylome and transcriptome profiling of midgut of Bombyx mori infected with BmCPV

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9Cei1hX1ZGQmlWODNzTHBhV2VTbWs2SEQ3YThQX0JyQmkzMUFfeE9qWkdyOGJhWmM1UFN5UXdIb19vMVlKd2ROSTlfZWkxN2NuclVvN2d3NW1tMFE2SEdN?oc=5" target="_blank">Genome-scale DNA methylome and transcriptome profiling of midgut of Bombyx mori infected with BmCPV</a>  <font color="#6f6f6f">Nature</font>

Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0
Naturetech

Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1RYngzOWJ4TlE0RWRIYnRtM2Zaemh3SUYxdjNtalViM1NVaXFLS2ZSUlg5LV82M3FxdktKNURJNXh0SHZRWkdyeHpad3NKdnFDYVNPSkZjdTllYk4wd3pJ?oc=5" target="_blank">Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0</a>  <font color="#6f6f6f">Nature</font>

Comprehensive genome-scale CRISPR knockout screening of CHO cells - Scientific Data
Naturegeneral

Comprehensive genome-scale CRISPR knockout screening of CHO cells - Scientific Data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBVUUVMaVBiMm02UTR4aEdYZnpJQVFuVHNVOFVqb1NENnMyLVozaXRMRk1NUXRjLTgzZHJ4QnZWSUwycVY1emZhMXcyWGFkTDVsZGpNSUdid01uSF81TU5R?oc=5" target="_blank">Comprehensive genome-scale CRISPR knockout screening of CHO cells - Scientific Data</a>  <font color="#6f6f6f">Nature</font>

Analysis of human metabolism by reducing the complexity of the genome-scale models using redHUMAN
Naturegeneral

Analysis of human metabolism by reducing the complexity of the genome-scale models using redHUMAN

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1Yalprb21kS29WOWRwYjFRck56RjBfM1c0am5YNFBQYjI1azluWUREV3NaZVVqV0FtbzdPZVVINmVDaXFza1pfejFGRFdqZ3piZDR4dUNKbXBLYjJpVG5V?oc=5" target="_blank">Analysis of human metabolism by reducing the complexity of the genome-scale models using redHUMAN</a>  <font color="#6f6f6f">Nature</font>

Integration of genome-scale metabolic networks into whole-body PBPK models shows phenotype-specific cases of drug-induced metabolic perturbation
Naturegeneral

Integration of genome-scale metabolic networks into whole-body PBPK models shows phenotype-specific cases of drug-induced metabolic perturbation

<a href="https://news.google.com/rss/articles/CBMiXkFVX3lxTFBUaWluMkVWUEN1aDk2U0JSUnBzY2xHNkFWbFlwQVBIRWMwVkpwUUdGTEZBUlFhU1owczFlQlF5dkl3aG9YNml5eWdJWWJVOXp2cXJQd0RzTmFfU0pBNHc?oc=5" target="_blank">Integration of genome-scale metabolic networks into whole-body PBPK models shows phenotype-specific cases of drug-induced metabolic perturbation</a>  <font color="#6f6f6f">Nature</font>

Genome-scale Capture C promoter interactions implicate effector genes at GWAS loci for bone mineral density
Naturegeneral

Genome-scale Capture C promoter interactions implicate effector genes at GWAS loci for bone mineral density

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE81eWtUTXZMbjN0NHBFdERkN2RGcjBwRmxuM0liYldMY0pqb2ZveGNpbC1nOC1Qb3pTZnR2YnJLVFhIQWZVcDFockM3V1dwcWVHVkhfV1RJWldGZll4bHJV?oc=5" target="_blank">Genome-scale Capture C promoter interactions implicate effector genes at GWAS loci for bone mineral density</a>  <font color="#6f6f6f">Nature</font>

A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity
Naturegeneral

A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9Oa24tYUs1MGRsTGRFMmwweHZqYVNTamc4YUhNMUZfMzE3ZjFxRnNCQ1BXSTZRTmptRlJfUDByc2dxSlJJal80aUwtY0hLQ2kzQ2E1NE82a3dPejZrZXVB?oc=5" target="_blank">A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity</a>  <font color="#6f6f6f">Nature</font>

Genome-scale CRISPR screening for potential targets of ginsenoside compound K
Natureworld

Genome-scale CRISPR screening for potential targets of ginsenoside compound K

<a href="https://news.google.com/rss/articles/CBMiXkFVX3lxTE0zTmd3dEdHSXlKYVVMeXpDT05xU2VmbUFTZHpkeElROXR4TWo3WG1ZVE1vUnRYSTB5M0tmdUZwS0p3dFlWOXVnMUlhSFZLejJiUzd0MXg4SkdSRXBqcEE?oc=5" target="_blank">Genome-scale CRISPR screening for potential targets of ginsenoside compound K</a>  <font color="#6f6f6f">Nature</font>

Automated multiplex genome-scale engineering in yeast
Naturegeneral

Automated multiplex genome-scale engineering in yeast

<a href="https://news.google.com/rss/articles/CBMiVkFVX3lxTE90YnhWNmpRVnJ4NmdtLWhzR0xOM1BjeXNpMjFCZ1FrS1RwWHZSWTlxQWhrNkxJVnYzeGNnR0FkMW1xa0w4U1hBZEFyaXRxR2NXZzRjSlZB?oc=5" target="_blank">Automated multiplex genome-scale engineering in yeast</a>  <font color="#6f6f6f">Nature</font>

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