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Category:All HeadlinesWorld & GeopoliticsMarkets & EconomyTech & AIPoliticsSearch results for: "Analyzing single cell tra" (30 stories)

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Single cell spatial transcriptomics track the evolutionary hierarchy and microenvironment remodeling during breast carcinoma invasion
Lead StoryNaturegeneral
Jul 2

Single cell spatial transcriptomics track the evolutionary hierarchy and microenvironment remodeling during breast carcinoma invasion

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBGYzEzWUh2aDNZQm5iMy1vUExQUGdRaVVzZzRYbGZpRXpMREF5WXB0Y2xxeHFvN3Fkck1RMDhtMURrS192VjNaQ2xFeHdidGYxQ0FnT0g0MXFVOXdVUEpv?oc=5" target="_blank">Single cell spatial transcriptomics track the evolutionary hierarchy and microenvironment remodeling during breast carcinoma invasion</a>  <font color="#6f6f6f">Nature</font>

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Search Results for "Analyzing single cell tra"

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29 stories displayed
Pan-cancer analysis of single-cell profiles with polygenic signals reveals genetic influences on tumor immunity across cancers
Natureworld

Pan-cancer analysis of single-cell profiles with polygenic signals reveals genetic influences on tumor immunity across cancers

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1SRDFHeWdkWkdmOGI0aHktQ29DcWZUS0U4TXc4b3NJWGY0NTFLSXpJc3hrS1IyQ0psMVQxa0ZTZmlBUmhWc2FwaDFvbkVaUC1XZGpPbVhmNWpBeWQwcGFj?oc=5" target="_blank">Pan-cancer analysis of single-cell profiles with polygenic signals reveals genetic influences on tumor immunity across cancers</a>  <font color="#6f6f6f">Nature</font>

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Feature-preserving manifold approximation and projection to analyze single-cell data
Naturegeneral

Feature-preserving manifold approximation and projection to analyze single-cell data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1FLUxKWXIzb3FnSmItQWhtRDV5MzFFdVY0WF9SZ2dVUDlRSmhzaDlYZEVvZEpqSXJHMHF5MmxVMnBWczJjb2FNbTk4S3BSVXBJNXBJOFV6dll5dkRvZGZr?oc=5" target="_blank">Feature-preserving manifold approximation and projection to analyze single-cell data</a>  <font color="#6f6f6f">Nature</font>

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Single-cell analysis reveals multi-faceted features of B cell development, together with age-associated B cell subpopulations | Communications Biology
Natureworld

Single-cell analysis reveals multi-faceted features of B cell development, together with age-associated B cell subpopulations | Communications Biology

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9HcUNNeDJZa0RzbkRqY3luU2JSWDlwLTE5bzFrNjBTTTJBVE1NQWZNeFkwMnlCUVpWNWc5UFJvZ1BJUk02VTZfOExLQTBWRHhqNHljQWpNNEtCeTVBeV9V?oc=5" target="_blank">Single-cell analysis reveals multi-faceted features of B cell development, together with age-associated B cell subpopulations | Communications Biology</a>  <font color="#6f6f6f">Nature</font>

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Pertpy: an end-to-end framework for perturbation analysis
Naturegeneral

Pertpy: an end-to-end framework for perturbation analysis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5qckQtR3cydi0wa0hSU0YtNG1RazZQWFdrTGYxN29YckNwM2xJN256bFlnTVU4RnFJWXRjZUJuMTlEZy1OaTdRU21qZ0h1S2h4YlUwMVJpZno0VzA2d3dz?oc=5" target="_blank">Pertpy: an end-to-end framework for perturbation analysis</a>  <font color="#6f6f6f">Nature</font>

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Deciphering cell-fate trajectories using spatiotemporal single-cell transcriptomic data
Naturegeneral

Deciphering cell-fate trajectories using spatiotemporal single-cell transcriptomic data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE04dlBtLTNGWkhPcnpnOTZWakhwamZLU0pFdV9FT3pjbWFzOHBTcEFwQlFQOE1QZmx2VUhoUGkwcFR0RGpGdFNwYU92WGxhaHF1TmxTVGRSX0Z1VExHSnhN?oc=5" target="_blank">Deciphering cell-fate trajectories using spatiotemporal single-cell transcriptomic data</a>  <font color="#6f6f6f">Nature</font>

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tissue-resident memory T cells to attenuates rejection in transplantation
Naturegeneral

tissue-resident memory T cells to attenuates rejection in transplantation

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBPRlZwbG5OODdKUVUwT0ZyZzhhREpoZFF6cTF2aUFjX1pwUUlUaFlQN0F6a0pTSk9nejBVS2w3LVV6MHF4Rkh5cWU1UkIzdWhtTzhlYl9lYXpUcHI0QUdR?oc=5" target="_blank">tissue-resident memory T cells to attenuates rejection in transplantation</a>  <font color="#6f6f6f">Nature</font>

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STORIES: learning cell fate landscapes from spatial transcriptomics using optimal transport
Naturegeneral

STORIES: learning cell fate landscapes from spatial transcriptomics using optimal transport

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1CS1Y1Z1lsOEhEWVo1ZjBNeFEzNEJxSnVhWGE0b003MjRzTzFLN05QaDlIaGNEX0ROR3pKTmRFVDZBSzFGaVdwZWQ4TGxYMk8yVmRPeGtkVExtT1hZVlA4?oc=5" target="_blank">STORIES: learning cell fate landscapes from spatial transcriptomics using optimal transport</a>  <font color="#6f6f6f">Nature</font>

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Best practices for single-cell analysis across modalities
Naturegeneral

Best practices for single-cell analysis across modalities

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9URW9FN0cxX1dzNEFKSHBoNkhOdmFMT2VUX0xia1VwemVwNXBVWVVxSXM0RUFELXRZeG5UT1J1VFVQMG04RTlDT3EyT25mUzdHckx1OGRGQVRmZXhRMGpz?oc=5" target="_blank">Best practices for single-cell analysis across modalities</a>  <font color="#6f6f6f">Nature</font>

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Discovering molecular signatures in kidney transplant biopsies with borderline changes and isolated V-lesions: single-cell RNA-sequencing analysis of human blood and tissue Spatial transcriptomics
Naturegeneral

Discovering molecular signatures in kidney transplant biopsies with borderline changes and isolated V-lesions: single-cell RNA-sequencing analysis of human blood and tissue Spatial transcriptomics

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1WV1lFaXFUbzB4WnM2REI2a1FUa2hSdGZGQjllMVBabUhFZDBkUWNDVUpOMXJncktjdkI0TjhRX0JVai1qVHdQQWJwS2Q1TklUeWg4V0N1N2RwczAzSEpn?oc=5" target="_blank">Discovering molecular signatures in kidney transplant biopsies with borderline changes and isolated V-lesions: single-cell RNA-sequencing analysis of human blood and tissue Spatial transcriptomics</a>  <font color="#6f6f6f">Nature</font>

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Single-cell analysis identifies dysregulated cell type-specific gene programs and intercellular crosstalk underlying colorectal cancer
Natureworld

Single-cell analysis identifies dysregulated cell type-specific gene programs and intercellular crosstalk underlying colorectal cancer

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1sUjBEYXdMcUtWa2tKTHc2Zm5EdllBaHpTbjBWOXc3aVlyNEZWVks0c01HTDlacFlsR1dYMDlUajllTjlaOTlXclRpdmVGcW14UllXaUdrbXpFTzlVNWVZ?oc=5" target="_blank">Single-cell analysis identifies dysregulated cell type-specific gene programs and intercellular crosstalk underlying colorectal cancer</a>  <font color="#6f6f6f">Nature</font>

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Transcriptome analysis combined with single-cell analysis identified that APOC1 influences cholesterol transport by macrophages in ccRCC
Naturegeneral

Transcriptome analysis combined with single-cell analysis identified that APOC1 influences cholesterol transport by macrophages in ccRCC

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBENjhQWmdZTGVDNzdMeW5YN3Jzbm1waU9OMzdVaW16QmtLTGNjbkZOUnRNMl9VS3lPV01BWEdsMUtsZE5RTGNDWUJCTW5OOTR6UXVMLWpFREdLMFpNSTA0?oc=5" target="_blank">Transcriptome analysis combined with single-cell analysis identified that APOC1 influences cholesterol transport by macrophages in ccRCC</a>  <font color="#6f6f6f">Nature</font>

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Pathway centric analysis for single-cell RNA-seq and spatial transcriptomics data with GSDensity
Naturegeneral

Pathway centric analysis for single-cell RNA-seq and spatial transcriptomics data with GSDensity

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1ZLXkzNlVnMGQtUXBjTlNVbTVPc1BZMmo0TlUxY1d0NFdlbHpNT0s0cXczWDFzbWdfMkpZMEtBcHpkVC1zQ2hENm5MVWpkeVhvd1U5a29acENKM2drTjdz?oc=5" target="_blank">Pathway centric analysis for single-cell RNA-seq and spatial transcriptomics data with GSDensity</a>  <font color="#6f6f6f">Nature</font>

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Integrating machine learning and single-cell transcriptomic analysis to identify potential biomarkers and analyze immune features of ischemic stroke
Natureworld

Integrating machine learning and single-cell transcriptomic analysis to identify potential biomarkers and analyze immune features of ischemic stroke

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5pTEEybU5zd0xvc0pnWXJXdHdMSXQyX0M5cllQeVpXeDVNdVBrRWdMMFMybk0xdklQUG9Nc1JrZGU3WWV4dlNOVUVFY0NjWWlWMzMyZWFkYXpfTl9qUThZ?oc=5" target="_blank">Integrating machine learning and single-cell transcriptomic analysis to identify potential biomarkers and analyze immune features of ischemic stroke</a>  <font color="#6f6f6f">Nature</font>

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Analysis of multi-condition single-cell data with latent embedding multivariate regression
Naturegeneral

Analysis of multi-condition single-cell data with latent embedding multivariate regression

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5pc2R1RG0yd2oyQzN3THhKVW9GWWtDNFNobUhrZ3VhTlBJQ0FERmhlak5sSU9wQ0RjZGI2WXRBeGNUVVQtVlpOaEI1QmZnZjE2TVpuTVQxSmhMRG1ZWDY0?oc=5" target="_blank">Analysis of multi-condition single-cell data with latent embedding multivariate regression</a>  <font color="#6f6f6f">Nature</font>

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Interpretable single-cell factor decomposition using sciRED
Naturegeneral

Interpretable single-cell factor decomposition using sciRED

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9DbjRlX1dmZHVtSTJxOHF2Q0UtQUxFb3VidklTY3pJZGo4TlRMSDZNY1ZDNV92cHVQcXpsRkJkQ2ltREs0Ti1PWEFLcGtOcF9PcGRpQmc2LTZ1LXNpM1pR?oc=5" target="_blank">Interpretable single-cell factor decomposition using sciRED</a>  <font color="#6f6f6f">Nature</font>

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Large-scale single-cell analysis and in silico perturbation reveal dynamic evolution of HCC: from initiation to therapeutic targeting
Naturegeneral

Large-scale single-cell analysis and in silico perturbation reveal dynamic evolution of HCC: from initiation to therapeutic targeting

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFA5Rm1ZZGNDZGY3ZWVKSGpaNmdPVzVjMmRVd2NXRXphRmpCTjhFeUk2aTZaWGRaNzlENl9WRkRCQURYNW5ZTkN4Z3h6eUJ4a2JSdG1NTWczMno1aXdLNlpJ?oc=5" target="_blank">Large-scale single-cell analysis and in silico perturbation reveal dynamic evolution of HCC: from initiation to therapeutic targeting</a>  <font color="#6f6f6f">Nature</font>

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Single-cell and spatial transcriptomics analysis of non-small cell lung cancer
Natureworld

Single-cell and spatial transcriptomics analysis of non-small cell lung cancer

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE00N2l0Yk9IQjV2eXVxa2ZZVkJmem41bEk4M2ROU1NpV1VuODhHblpXMTRBSlMwQjAxOGItZmVmenJNYlVxcmJkZkRxb0kxa2FxUmVvNk1iMzZIeXVPZzlB?oc=5" target="_blank">Single-cell and spatial transcriptomics analysis of non-small cell lung cancer</a>  <font color="#6f6f6f">Nature</font>

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Single cell transcriptomics comes of age
Naturegeneral

Single cell transcriptomics comes of age

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5wRWJDai1WN1dZWTlRazQ1ZkdEdDk4R2JZVWkzbUhzUlZDTUhmMGx4Uy1wVWxuV1pQVnRxaFRnWDFJdUdScFlMR1dCcTJUWUM2RHQxOWFueDNfS1FyNGRj?oc=5" target="_blank">Single cell transcriptomics comes of age</a>  <font color="#6f6f6f">Nature</font>

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Causal identification of single-cell experimental perturbation effects with CINEMA-OT
Naturegeneral

Causal identification of single-cell experimental perturbation effects with CINEMA-OT

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE8zNEF6Um9tc0Z0Rk5FSUhMWTJFa0tWWnNfOXBfOUcyWHV5OTJWYnlOQkZsamtwUUlCc0dWSXFCMExfd1I4U0JJQ0FrRFltdmF0SjFVek5zTmhBc29FZGtn?oc=5" target="_blank">Causal identification of single-cell experimental perturbation effects with CINEMA-OT</a>  <font color="#6f6f6f">Nature</font>

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A unified computational framework for single-cell data integration with optimal transport
Natureworld

A unified computational framework for single-cell data integration with optimal transport

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBWc1YyVU1XeTNYOTVVR2h6WWZaM2I4bk14bXhqWmlYVnRoQ2l4b25SMjU1QWJaSWxKanF2TkhzeEZxVlE0UGpRa3RqdjVzYnotMEd0UHZQVXVFSURkMzg0?oc=5" target="_blank">A unified computational framework for single-cell data integration with optimal transport</a>  <font color="#6f6f6f">Nature</font>

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Screening cell–cell communication in spatial transcriptomics via collective optimal transport
Natureworld

Screening cell–cell communication in spatial transcriptomics via collective optimal transport

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1lYXNaeWJMeDUwdTMtaVFMQkRnNjZtTmZxNW80c3I1elJyYTRMcDRhc0tBU29IQzZjVUJlbkJqX012TEtzRTZEQ3BFWVFCazh1R0pQNWFTZEpQNzJCRFlv?oc=5" target="_blank">Screening cell–cell communication in spatial transcriptomics via collective optimal transport</a>  <font color="#6f6f6f">Nature</font>

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Imaging-based STAMP technique democratizes single-cell RNA research
St. Jude Children's Research Hospitaltech

Imaging-based STAMP technique democratizes single-cell RNA research

<a href="https://news.google.com/rss/articles/CBMi5wFBVV95cUxOa19XZ1pFTDRsZ3R0VzlGaEtXYUN5WWFkNUFla0NOa1plRW1oYTcxUkhybHA1YWd6WHZsZm1CMFJER0dmUnpGNTVkb0J3dFF0T0NVbU1ORjFBOHBHcHNBZ0doY3JWU0NkQ3lYNzBITE5xczdIWEJ2U3A2RDkwLVhMdV9YT0pHUWNJUjgxUEJqVTRwTWZaRF92VTRSekRISllFQkY3cEstNmxDVzFvcnFHQ2lzWXFkWjN5OWZTdFo1d1ByNWhLU1hmZ2t0bHAyM2hXTmhBUFUwU0duQndmazdiSWM3Yy1yckU?oc=5" target="_blank">Imaging-based STAMP technique democratizes single-cell RNA research</a>  <font color="#6f6f6f">St. Jude Children's Research Hospital</font>

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Multi-modal generative modeling for joint analysis of single-cell T cell receptor and gene expression data
Naturegeneral

Multi-modal generative modeling for joint analysis of single-cell T cell receptor and gene expression data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9EcGlWRnRrdkpBZHRvVHhQTnZmWklrVTc2b1U5a0VEWDVRTGZvVUh4dHRUUTh5Nk9aYU9uZ183SkhYVHRnM0dYdk5ZRGMxOW9mV3o1QTdqZVJsSGkxcm9R?oc=5" target="_blank">Multi-modal generative modeling for joint analysis of single-cell T cell receptor and gene expression data</a>  <font color="#6f6f6f">Nature</font>

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A statistical framework for differential pseudotime analysis with multiple single-cell RNA-seq samples
Naturegeneral

A statistical framework for differential pseudotime analysis with multiple single-cell RNA-seq samples

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE03ZmI0ZDA4R2ZjcTJzbURYTS02a2VadWdqVEFtYzkycGNZNWk0VUYzVWVPNHFTRUlKbUozOVlzd1dMaXVlaWpCcUtZQU1VLW80RFpuVXFIUHh0WEhJSTM4?oc=5" target="_blank">A statistical framework for differential pseudotime analysis with multiple single-cell RNA-seq samples</a>  <font color="#6f6f6f">Nature</font>

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Application of deep learning models on single-cell RNA sequencing analysis uncovers novel markers of double negative T cells
Natureworld

Application of deep learning models on single-cell RNA sequencing analysis uncovers novel markers of double negative T cells

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE13d1VsdVVYSldLVlJJNl84THR2ek5pdEU1ZmlaOERsT1lXUElBUzdqeV9FXzNjbHNvWWUxS2ZpZDJ6QndvT2RRZEkzRktldUJGTlkweG9TZlNra2Rvd0Uw?oc=5" target="_blank">Application of deep learning models on single-cell RNA sequencing analysis uncovers novel markers of double negative T cells</a>  <font color="#6f6f6f">Nature</font>

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Single-Cell Analysis Reveals a Critical Role for Macrophage Epsins in Regulating the Origin of Foam Cells in Atherosclerosis
American Heart Association Journalsgeneral

Single-Cell Analysis Reveals a Critical Role for Macrophage Epsins in Regulating the Origin of Foam Cells in Atherosclerosis

<a href="https://news.google.com/rss/articles/CBMiakFVX3lxTE1tUkk5VEJoRlVHdExIMzMzT3dUZllONHpLOVBnRlFKM19CVmZWRXM0OXo3SUg1UFc4RHI1aVBmLTUyMkE1UGhrWEluU0h0RzhkZFRVbzNGVl9sZVIwc2ZEdW9zMm5WcUVrS3c?oc=5" target="_blank">Single-Cell Analysis Reveals a Critical Role for Macrophage Epsins in Regulating the Origin of Foam Cells in Atherosclerosis</a>  <font color="#6f6f6f">American Heart Association Journals</font>

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Multimodal analysis of RNA sequencing data powers discovery of complex trait genetics
Naturetech

Multimodal analysis of RNA sequencing data powers discovery of complex trait genetics

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE8yM0FjbkZ5QjE2d1lLUHVFMGlkQnd1M2xzVWNXb3NocXp4NzJZSGRMM1hDRll1YlpoWnVxd0dJWnNDalo2djRSbW8tVUVPMktFZlNYaUFhdmhlSE9kMUJr?oc=5" target="_blank">Multimodal analysis of RNA sequencing data powers discovery of complex trait genetics</a>  <font color="#6f6f6f">Nature</font>

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Exploring cell-to-cell variability and functional insights through differentially variable gene analysis
Natureworld

Exploring cell-to-cell variability and functional insights through differentially variable gene analysis

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBEMTY4MjA5YUxTUkpWVDVydTNJS0dROVFaWDgtcGp4Tk5uaHZpRFp6X2lTVEM3dnBYSGZBXzZSYTlYUnVHX1E5NmNsNnJ0NkFfcW0tR0k1ak1lSG9VNjdv?oc=5" target="_blank">Exploring cell-to-cell variability and functional insights through differentially variable gene analysis</a>  <font color="#6f6f6f">Nature</font>

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CellChat for systematic analysis of cell–cell communication from single-cell transcriptomics
Natureworld

CellChat for systematic analysis of cell–cell communication from single-cell transcriptomics

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE16Q0FnQXh6TGpKbTc1S2s5QVFZU2tpTmVJWkFUMFdRSFlScEpHai1xUmcwTms0dkd3eEJubXYxOTNjVkExc1RJanhEYlI3S09qSkx3ajdmeTltamJXSlFn?oc=5" target="_blank">CellChat for systematic analysis of cell–cell communication from single-cell transcriptomics</a>  <font color="#6f6f6f">Nature</font>

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