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Category:All HeadlinesWorld & GeopoliticsMarkets & EconomyTech & AIPoliticsSearch results for: "Aligning Spatial Transcri" (30 stories)

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Network model for alignment, stitching and slice-to-volume 3D reconstruction of large-scale spatially resolved slices
Lead StoryNaturegeneral
Mar 20

Network model for alignment, stitching and slice-to-volume 3D reconstruction of large-scale spatially resolved slices

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9aNmFEMGtFSDNNeUdRdVFOaUdaSUFXVXJKbV9JVjM0WkwwekRwc0FkcENjTWlYRFE2VjNaSTRKcHFjYVlBOW5IanRxNFo0cFlXZmVuelFwR0Z1OGdBb2NJ?oc=5" target="_blank">Network model for alignment, stitching and slice-to-volume 3D reconstruction of large-scale spatially resolved slices</a>  <font color="#6f6f6f">Nature</font>

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Search Results for "Aligning Spatial Transcri"

Updated every 3 minutes via FreeNewsApi, GNews, Currents API & Google News

29 stories displayed
Integration of imaging-based and sequencing-based spatial omics mapping on the same tissue section via DBiTplus
Naturegeneral

Integration of imaging-based and sequencing-based spatial omics mapping on the same tissue section via DBiTplus

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1xcVc5dmZ4VUI0M1hvVmVESDFRR3UzNE56cGVQUXhKb0YyZ29KTlp4cmNpVTVBRGdUYlRqM05TSm9mNTFmaXI2cTN4SnZ4MEZYS3ZDUTc3a0FWcUpjTFpr?oc=5" target="_blank">Integration of imaging-based and sequencing-based spatial omics mapping on the same tissue section via DBiTplus</a>  <font color="#6f6f6f">Nature</font>

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Integrating optogenetic fMRI and spatial transcriptomics to reveal circuit-specific gene signatures in fronto- and hippo-thalamic networks
Naturegeneral

Integrating optogenetic fMRI and spatial transcriptomics to reveal circuit-specific gene signatures in fronto- and hippo-thalamic networks

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5BdmNjanFHU19yNnBCZVk3SGhFN2p6U2tYY3pLTUFtMDZrUnlzUmozYlZKSFVFc0hkNmVwMk5fNGtRaU9SbW9YUVAzekVQUEFSa2NIa1FRQnVobkxoX2JJ?oc=5" target="_blank">Integrating optogenetic fMRI and spatial transcriptomics to reveal circuit-specific gene signatures in fronto- and hippo-thalamic networks</a>  <font color="#6f6f6f">Nature</font>

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One section, two worlds: single-cell integration of MALDI-MSI and spatial transcriptomics on the same single tissue section
Natureworld

One section, two worlds: single-cell integration of MALDI-MSI and spatial transcriptomics on the same single tissue section

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE0zd25fckdkV0YxM0I4bmFjdG1tb295emNhRzhVcGp4c191dVNBMElIc01tS0J3ek5XQ3pWa3JXZmpXNGlnSW52NVFpTTR3dlNIOUpRZ24td0F2Rzl5Z0Jv?oc=5" target="_blank">One section, two worlds: single-cell integration of MALDI-MSI and spatial transcriptomics on the same single tissue section</a>  <font color="#6f6f6f">Nature</font>

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Spatial transcriptomics maps host–gut microbiome biogeography at high resolution
Naturegeneral

Spatial transcriptomics maps host–gut microbiome biogeography at high resolution

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFB2bGlVS1RRczNkeW94MlN3ZlMzRXJUeVJxU0NjYlNZX19XaDBVdnkzRkNKajFCWnVQLUlOWThKNTI2ZGduc3dtdjdBTFlLb1ZOMU5td0FUWXhWY2Jqc2xB?oc=5" target="_blank">Spatial transcriptomics maps host–gut microbiome biogeography at high resolution</a>  <font color="#6f6f6f">Nature</font>

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ELLA: modeling subcellular spatial variation of gene expression within cells in high-resolution spatial transcriptomics
Naturegeneral

ELLA: modeling subcellular spatial variation of gene expression within cells in high-resolution spatial transcriptomics

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5rQnQzM2RSOXB4S01xRFhhODN2Y3JnaDBybmg5T3VWLXBYOEZrTk1wcWo5NmxEZGpzc3VSWGU3OFBfN0RYUnpBaXpTRUVfRG5yVFFqY2NKT0pjenJWdU9j?oc=5" target="_blank">ELLA: modeling subcellular spatial variation of gene expression within cells in high-resolution spatial transcriptomics</a>  <font color="#6f6f6f">Nature</font>

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Systematic benchmarking of high-throughput subcellular spatial transcriptomics platforms across human tumors
Naturegeneral

Systematic benchmarking of high-throughput subcellular spatial transcriptomics platforms across human tumors

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE42TDNmU21oMkZrdXRQbVBrSXlNM0hOanFLd0p3Q212NkJxcmVKX0xCR1U5SXBqbzJUd2ktbHp2OUFSbnRkdTlDVGVUbzdBVWh2aTU0X1BFdzVoMEdrVFc0?oc=5" target="_blank">Systematic benchmarking of high-throughput subcellular spatial transcriptomics platforms across human tumors</a>  <font color="#6f6f6f">Nature</font>

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STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping
Naturegeneral

STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5tbllTS2sxcVBUdk9Jd1p5TENoRm1EREVHZ2l1RjNaWkFpam9XRFM2Qlp3ZU1FeTAxSGtzbkZ1R21OcXJTVDZTMVlpUUJXc3lVNGpYTlVmbDBUVUc4Tng4?oc=5" target="_blank">STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping</a>  <font color="#6f6f6f">Nature</font>

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Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE
Natureworld

Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE96RzJKU08xTVRhNUxpUW1UbDBhcjlSUkxQcTUtRUVIbk1NUmphTFJfVjZ3SFk1Wms5V3kxdksyLWJNeUVsLUdGbGV4VDhROVptMGZCbjJVM05vc1hfTkRz?oc=5" target="_blank">Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE</a>  <font color="#6f6f6f">Nature</font>

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Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram
Naturegeneral

Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFB1eE96Qnp6WENiSllCTUJYaHd4b1Y0aE0yOWJtRlNaQUFtbnY4WU54T1RMSUlQRHFIcFdXQ0RkVEdOU0JWbVJqUk0yVFVkS2ZVLTIzMXc5ZHpvYXhMbUFj?oc=5" target="_blank">Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram</a>  <font color="#6f6f6f">Nature</font>

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A visual–omics foundation model to bridge histopathology with spatial transcriptomics
Natureworld

A visual–omics foundation model to bridge histopathology with spatial transcriptomics

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE84enNhajdTTUp1NzNRVkJpUmhnNWhFQl9EQVhJS0N3dU5yMzcwRkdpcTZoOGoyd1Y4ay1lcjM3UWtxRlo2X3R3MFJQZ2dOSEoxXzBuZ3VkN085Y3d2c2s4?oc=5" target="_blank">A visual–omics foundation model to bridge histopathology with spatial transcriptomics</a>  <font color="#6f6f6f">Nature</font>

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Benchmarking alignment methods for spatial transcriptomics data
Naturegeneral

Benchmarking alignment methods for spatial transcriptomics data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5zM04zN0lUZjRxSTVoSEV2R0plVXdnY295M0RmT3V5YjNKTnNrRDlURWY2VklvMk1zc3VOQlF3bXBHek1nMFhfNFBiWWROdENyX2N3OUM4cS1TNTM0a0hz?oc=5" target="_blank">Benchmarking alignment methods for spatial transcriptomics data</a>  <font color="#6f6f6f">Nature</font>

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Spatial-linked alignment tool (SLAT) for aligning heterogenous slices
Naturegeneral

Spatial-linked alignment tool (SLAT) for aligning heterogenous slices

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1iNFBRbkxzSUpMOUhhZEZ3SGliQ0p6LVJlTDJja1o5QWN5bEFsc0NZNmlmLTNQYTRDMGF6OGZiVTRxbENHT1JBWTBaTGdkNzJNa0QwZXJDYjZ1U2NXTVhV?oc=5" target="_blank">Spatial-linked alignment tool (SLAT) for aligning heterogenous slices</a>  <font color="#6f6f6f">Nature</font>

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Alignment and integration of spatial transcriptomics data
Naturegeneral

Alignment and integration of spatial transcriptomics data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5yY2VWTzJqYVp3RlVBdTd5Ujg5UnN4R3Fod3B2WTYwS210NVFxaDV4S0Q4bmlCcUJENWYyWndpeEhtUm5zUHIwZV9JYnZxWENkNmtVSWU4aWk4X0pJaUJR?oc=5" target="_blank">Alignment and integration of spatial transcriptomics data</a>  <font color="#6f6f6f">Nature</font>

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SPACEL: deep learning-based characterization of spatial transcriptome architectures
Naturescience

SPACEL: deep learning-based characterization of spatial transcriptome architectures

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE5EX0RCM0xXM1hSNnAxTTdCUFJwQ0lrUU1vNWJxX2NLV1dEbDZiWjlkRFZNM2dETHhCSVpBYzdVREpxdzRjenFrbkZzYzZpb24zcG5kLVFIV09YMkhOT21n?oc=5" target="_blank">SPACEL: deep learning-based characterization of spatial transcriptome architectures</a>  <font color="#6f6f6f">Nature</font>

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Interpretable, flexible and spatially aware integration of multiple spatial transcriptomics datasets from diverse sources
Naturegeneral

Interpretable, flexible and spatially aware integration of multiple spatial transcriptomics datasets from diverse sources

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE82T2FqSDd4enRZVl95d3RDU2FGekMySXVBbnZTSko0bm9yRTQ3UFdmXzZ2VGFsRGdVU0NvNUQwTjM0NWtFZ1JiRmg4TlJpS0t5N3pHSjZsNl9DOS16SFZV?oc=5" target="_blank">Interpretable, flexible and spatially aware integration of multiple spatial transcriptomics datasets from diverse sources</a>  <font color="#6f6f6f">Nature</font>

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Image guided construction of a common coordinate framework for spatial transcriptome data
Naturegeneral

Image guided construction of a common coordinate framework for spatial transcriptome data

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBNTjBPdnNWUnBJTzVVNWpSaHN6cWdvYmZoMGU1ODhETUdMMHVaWndPZU5MakdxY0tYVDRqd2RxZXctVmppZDFic2ZhX2VJOThvSG9yWUd6RnFoU2ZjcUdV?oc=5" target="_blank">Image guided construction of a common coordinate framework for spatial transcriptome data</a>  <font color="#6f6f6f">Nature</font>

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High-resolution alignment of single-cell and spatial transcriptomes with CytoSPACE
Naturescience

High-resolution alignment of single-cell and spatial transcriptomes with CytoSPACE

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBja3FNT3dVUVo2LTBTazUxLWZhd29YbFVkRkZZVGpreHdjSF94V1RmYXhNVWVMRmdhLTNkMjByenZ1YnF4ZTlxUV9BSUNVMUtZcWdIRlQ5bHB3RGlIQVJz?oc=5" target="_blank">High-resolution alignment of single-cell and spatial transcriptomes with CytoSPACE</a>  <font color="#6f6f6f">Nature</font>

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Bering: joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings
Naturegeneral

Bering: joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1hWHdheXVDVlR0NnZIV1NMdERhb2dkdnFHQ0ZXR1NDX19CTG5jSUhBM0I2N3dMWlJkSENjbklZZXgwa1FvTDBVellpRmczVXhxd0dEeENUbUFueTEyeXZJ?oc=5" target="_blank">Bering: joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings</a>  <font color="#6f6f6f">Nature</font>

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Integrating spatial and single-cell transcriptomics data using deep generative models with SpatialScope
Naturegeneral

Integrating spatial and single-cell transcriptomics data using deep generative models with SpatialScope

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9wSGhiVkJPYXJZQ2dsbEtfNVZhUUZqWkZEbEFLVG1RQ3NWU0dKdm1PTGpaemNkQlEzdzA0Mjdsc3VrZ3RSNlN5Q2FQOXFzV2dTcFBtbzljUUgtRWtURndZ?oc=5" target="_blank">Integrating spatial and single-cell transcriptomics data using deep generative models with SpatialScope</a>  <font color="#6f6f6f">Nature</font>

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Multimodal spatial transcriptomic characterization of mouse kidney injury and repair
Naturetech

Multimodal spatial transcriptomic characterization of mouse kidney injury and repair

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFAxcWVnbUJ4MUxtTENBSXlMSkhrU2RjWFpBX0haSE5EamV2YXk5akFfNzhDV2ptekFFWUtSRjd5ejFzY2RBOEtJVTMyZkZDZXV2bVpYSUU0X2M0Vk1KR19J?oc=5" target="_blank">Multimodal spatial transcriptomic characterization of mouse kidney injury and repair</a>  <font color="#6f6f6f">Nature</font>

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Thor: a platform for cell-level investigation of spatial transcriptomics and histology
Naturegeneral

Thor: a platform for cell-level investigation of spatial transcriptomics and histology

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE9DUk5vclRLU3NkLVB4M21qLWZ1UUY4Vi1UbzVuZkd1UkpoRFV6ekJGV0VBRXMtdmQwYjA5eC0tQTI2eTBvLUkySDd6M1F6STFKWHh2azJERjRPelRza2Nz?oc=5" target="_blank">Thor: a platform for cell-level investigation of spatial transcriptomics and histology</a>  <font color="#6f6f6f">Nature</font>

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Seq-Scope-eXpanded: spatial omics beyond optical resolution
Naturegeneral

Seq-Scope-eXpanded: spatial omics beyond optical resolution

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFBYME1IZ2xRcDFqQXlJVlVSV0hwMGdyTktiNXFUdWoxaDNtRng4OTJWbmZKcGtIUVQwYmhDZVNsc0dXMlV6UTdFank0OHlZT0Y1QUM1OEFqRzc5MGYwU0x3?oc=5" target="_blank">Seq-Scope-eXpanded: spatial omics beyond optical resolution</a>  <font color="#6f6f6f">Nature</font>

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Systematic comparison of sequencing-based spatial transcriptomic methods
Naturegeneral

Systematic comparison of sequencing-based spatial transcriptomic methods

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1HZl9mYnBPUENMUEtSQ3dIRkcyeXBPMURhdE0xWFVIV1dOdmwxRloxWUxsbTdzdGQzdEtqOHYtQ25BR3hEcXVpT3YwckV1SnB1T0tqclNwYjNXTnhOb01F?oc=5" target="_blank">Systematic comparison of sequencing-based spatial transcriptomic methods</a>  <font color="#6f6f6f">Nature</font>

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Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST
Naturegeneral

Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE53bjhHaEpSTVNOd1g1MEZpSlFzNFhvd0hxOHh1U2R6ZWk4YmNvUXk1c2hPRVJNeS1ueUJudlYyTU1IN1FLbkt4NUNSTlZHR3g5Wm40dFpnYmJvQU5iRDZz?oc=5" target="_blank">Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST</a>  <font color="#6f6f6f">Nature</font>

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Spotiphy enables single-cell spatial whole transcriptomics across an entire section
Naturegeneral

Spotiphy enables single-cell spatial whole transcriptomics across an entire section

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTFA5X1c5TzZyRjJKVTJNbldEOFMza0VaeXBja1cxbzIyWkFtTWFYYUNQcVNjbjk3VnduRzR5Tkdkc0RaaWVjRXFkRFdIRlowOEkxc0FEc1JMUmRyTVEyZG1J?oc=5" target="_blank">Spotiphy enables single-cell spatial whole transcriptomics across an entire section</a>  <font color="#6f6f6f">Nature</font>

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Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues
Naturegeneral

Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE43OXBYT0ZwZ3NNTkdUYmVDc2ZCV1hPSzJUeWk2VFJrb21mcjlGN2ZnUkFtNDVTVWo1SnpMaHZfSUxJaG5qLVA5LXZ0VTBxOWlvU0pLMHZpYVUzZnp4cXBv?oc=5" target="_blank">Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues</a>  <font color="#6f6f6f">Nature</font>

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Alignment of spatial genomics data using deep Gaussian processes
Naturegeneral

Alignment of spatial genomics data using deep Gaussian processes

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE8xR19CTnVFNS11UWtLdE9qSkEzb0poSUFXOTE4Rnp4RnhZT2MtcVZ2dmhoWGptVkZmbmlkd3h6VmlfVkNCVDdtUk9PS1c4SmIyTVAwTS1NYWdvTHR2Sm1J?oc=5" target="_blank">Alignment of spatial genomics data using deep Gaussian processes</a>  <font color="#6f6f6f">Nature</font>

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Spatially resolved integrative analysis of transcriptomic and metabolomic changes in tissue injury studies
Naturegeneral

Spatially resolved integrative analysis of transcriptomic and metabolomic changes in tissue injury studies

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE94R09nb3E4cGV6Smp1LWZLdDdDVjhuY095aUw0eGcwb0hiLWdJQ2FvTGRLdWVuaW9KNHhubmJpMTMxeHNqYnFYVHoxOWNEcFpmNVZNc3R2WHNFakRUSmxz?oc=5" target="_blank">Spatially resolved integrative analysis of transcriptomic and metabolomic changes in tissue injury studies</a>  <font color="#6f6f6f">Nature</font>

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STORIES: learning cell fate landscapes from spatial transcriptomics using optimal transport
Naturegeneral

STORIES: learning cell fate landscapes from spatial transcriptomics using optimal transport

<a href="https://news.google.com/rss/articles/CBMiX0FVX3lxTE1CS1Y1Z1lsOEhEWVo1ZjBNeFEzNEJxSnVhWGE0b003MjRzTzFLN05QaDlIaGNEX0ROR3pKTmRFVDZBSzFGaVdwZWQ4TGxYMk8yVmRPeGtkVExtT1hZVlA4?oc=5" target="_blank">STORIES: learning cell fate landscapes from spatial transcriptomics using optimal transport</a>  <font color="#6f6f6f">Nature</font>

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"Aligning Spatial Transcri" — Live Google News Trends & Headlines